| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0403 |
|---|
| Symbol | |
|---|
| ID | 7103361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 405621 |
|---|
| End bp | 407126 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643473512 |
|---|
| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
|---|
| Protein accession | YP_002370656 |
|---|
| Protein GI | 218245285 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
|---|
| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACT TTAATGGTAT CTTAAATTTT GGGCGACGAT TCCCTCAACT CTTACTAATA
TTATTCTGTT TTGGGGAAGC TTTATTGACT AAACAACTCC TCGCAATTAA TCCGACTGAT
GTTAACTCGA AAACAACTCA AAATTTTGAT AATTCTCAAG TTTGTTCAGC CGATGTAGCT
GAGTTAATTA ATGATATTAT TACTCAGGAT AAATTTAAGC GATCGCGGTG GGGTATTCTC
GTTCAAACCT TGGAGTCAGG AGATATGTTA TATGCGTTAG AAAAAGATAA ATATTTTCTC
CCCGCTTCTA ATGTAAAATT GCTGACAACA GCAGCAGCAT TATTTAAGTT TGGTTCGGAA
TTTCGGTTTA AAACGCCGAT TTATATAAGC GGAAATTTTC CCCATTTGAA AACTTTACGA
CTGGTGGGAA AAGGTGATCC GAGTTTAACA ACTGAAAAGT TACAAAACTT AGCTAAACTG
TTAAAGCTTC GGGGAGTCAC TCAGATCGAT CATTTGATTA TTGAAGCAGA AAATATCGAT
GAGTCTGGAA TTAATCCTAC TTGGGAATGG GAAGATGTTC ACTATAATTA TGCAACAGCA
GTTAATGATT TAATTCTCAA TGAAAATTCA GTTACTTTAA CGTTAGTTCC CCAAAAGATC
GGAGAACCAT TAAAATTAGA ATGGTCTGAT CCCATTGCAG CAGAACAATG GCAAGTTAAC
CATCAGGCAA TAACAGGAAA AAAAGGGACA CCTTATTCGA TAGCCATAGA AACGAAATTA
GGGCAACCTA TTTTAAACAT CAAAGGAGAA TTAGCCATTG ATTCTGAACC CGATCAATTC
GGGTTAGCGG TTGTTAATCC TAATGCTTAC TTTTTAGAAA CGTTAAAAAC TATTTTAATC
CGAGAAGGTA TTGGGGTTAA TTCGGCAACA ATTAATCAAT TAAAAAAAGA TTCTAATGAT
GACAAAAAAA TGACTGAACT TGAATCTGAA AACCTAGATA AATTAGTAAC AAAAGTCAAT
CAAGATAGTC ATAATTTATT TGCTGAAAGT TTATTAAAAT TATTGGCTAA TGATAGGATG
AATAAATCTA ACTTAGAAGG GTTAAACGAG ACTTTAACTC AATTAGGAGT TAACCCAATT
TCCTATCAGT TAAAAGACGG TTCAGGATTA TCTCGTCAAA ATTTAGTCAC TCCAGAAGCA
TTAGTCAGTA CCTTGAGATT AATGGCTAAA ACACCAGACG CGAAAACCTA CCAACAATCT
TTAGCGATAG GAGGAGTTAA TGGAACCCTA AAAAATCGTT TTCAAGGAAC ACCTATTCAG
GGAATAGTAC AAGCAAAAAC AGGAACTCTT CTAGGAACTT CTACCCTATC TGGTTATTTA
CAACCCCCTA ATTATCCTGA ATTAGTCTTT AGTATTATGG TTAATCAATC CGAGGTTTCC
TTACCCGAAT TAAGACAAGG AATTGATGAT ATTATTATCT TACTTAGCCA ACTAAAAAAA
TGTTAG
|
|---|
| Protein sequence | MADFNGILNF GRRFPQLLLI LFCFGEALLT KQLLAINPTD VNSKTTQNFD NSQVCSADVA
ELINDIITQD KFKRSRWGIL VQTLESGDML YALEKDKYFL PASNVKLLTT AAALFKFGSE
FRFKTPIYIS GNFPHLKTLR LVGKGDPSLT TEKLQNLAKL LKLRGVTQID HLIIEAENID
ESGINPTWEW EDVHYNYATA VNDLILNENS VTLTLVPQKI GEPLKLEWSD PIAAEQWQVN
HQAITGKKGT PYSIAIETKL GQPILNIKGE LAIDSEPDQF GLAVVNPNAY FLETLKTILI
REGIGVNSAT INQLKKDSND DKKMTELESE NLDKLVTKVN QDSHNLFAES LLKLLANDRM
NKSNLEGLNE TLTQLGVNPI SYQLKDGSGL SRQNLVTPEA LVSTLRLMAK TPDAKTYQQS
LAIGGVNGTL KNRFQGTPIQ GIVQAKTGTL LGTSTLSGYL QPPNYPELVF SIMVNQSEVS
LPELRQGIDD IIILLSQLKK C
|
|---|
| |