Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0309 |
Symbol | |
ID | 7104034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 303104 |
End bp | 304036 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643473419 |
Product | Squalene/phytoene synthase |
Protein accession | YP_002370565 |
Protein GI | 218245194 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCAAC TGCCTAAACC ACCCCAACCC CAAAAAAACC TCACCTCTGT TGATGAGGCC TACGAACTCT GTCGCCAAAT TACAGCGAAG TATTCCAAAA CCTTCTATTT GGGAACTGCG CTGATGCCCC CCGAAAAGCG TCAAGCGATC TGGGCTATCT ATGTTTGGTG TCGTCGGACG GATGAATTAG TCGATGGGCC GCAAGCCCAA TTTACGACCC TCGAAACCCT GCAAGAATGG GAAGATCACC TAGAAATGGT CTTTTCTGGT CATCCCCTCG ATGATCTCGA TGTCGCTTTA GTCGATACCC TAGAACGTTT TCCTATCAAA ATTGACCCGT TTCGGGACAT GATCGCTGGA CAGAGGATGG ATCTCTATCG CAGTCGCTAT GAAACCTTTG AGGAACTGAA ACTCTACTGT TACCGTGTGG CTGGAACCGT AGGGTTAATG TCCAATGCGG TGATCGGGGT TGATGGAGAT GGATCACGAG TTCCTTGGAG AAGTCATCGA GACCATTATA TCCCCGAAGA AGAAGCGATC GCTTTGGGTA TTGCCAACCA ATTAACCAAT ATTCTGCGGG ATGTGGGGGA AGATGCCCAA CGCGGACGGA TTTATTTGCC TTTAGAAGAT TTAGAACGCT TTAATTATAG CCAAGAAGAC TTGTTTAAGG GGGTTATTGA TGACCGTTGG CGTGAGTTGA TGCGTTTTCA GATTGAACGA GCTCGTCACT ATTATCGGGA GTCTGAACGG GGTATTTGTC ATCTTTGTCG AGATTCTCGT TGGCCGGTTT GGTCGGCTTT GATGCTTTAT CAGGGGATTT TGGATGTCAT CGAAGCGAAT AATTATGATG TGTTTAAAAA ACGCGCTTTT GTTCCCACTG CCAAGAAAAT GCTCTATCTT CCGGTAGCTT GGTTGCGGGC TCAGGTTCTT TAA
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Protein sequence | MLQLPKPPQP QKNLTSVDEA YELCRQITAK YSKTFYLGTA LMPPEKRQAI WAIYVWCRRT DELVDGPQAQ FTTLETLQEW EDHLEMVFSG HPLDDLDVAL VDTLERFPIK IDPFRDMIAG QRMDLYRSRY ETFEELKLYC YRVAGTVGLM SNAVIGVDGD GSRVPWRSHR DHYIPEEEAI ALGIANQLTN ILRDVGEDAQ RGRIYLPLED LERFNYSQED LFKGVIDDRW RELMRFQIER ARHYYRESER GICHLCRDSR WPVWSALMLY QGILDVIEAN NYDVFKKRAF VPTAKKMLYL PVAWLRAQVL
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