Gene PCC8801_0220 details

Gene Information

• Locus tag: PCC8801_0220
• ID: 7103554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 213956
• End bp: 215887
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 643473333
• Product: penicillin-binding protein, 1A family
• Protein accession: YP_002370479
• Protein GI: 218245108
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0744] Membrane carboxypeptidase (penicillin-binding protein)
• TIGRFAM ID: [TIGR02074] penicillin-binding protein, 1A family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCGTCTA GCACTATCCG ACAACAACCC AAACCTCAAA AATCCCCGAA CCCTAAACCG 
TCCTTCGGTC AGGGTGTCAT CAAAGTAGCT GGAGGGACTG CCCTCGGCCT AGCCATGTTA 
GGCAGTTCCA TTATTGCCGG AGGACTGGTA GGACTAGCCA TTAGCTTTCG CAACCTCCCT 
GATGTCCGCA TTCTTAATAA CTATGCTCCC ACAGAAACCA GCTATATTTA CGATGTCAAG 
GGAAGACTGC TTTCAAGACT TCACGAAGAA GCCAACCGAG AAGTGGTTAG CATGGAGGAT 
ATTTCCCCTG ACCTCAAACG CGCGGTCTTA GCGATCGAAG ATAGCCATTT TTACTACCAC 
CATGGAATTA ATCCTACCAG TATTGGACGC GCTATCTGGG TTAACTACAG AAGTGGAGGT 
GTGGTGGAAG GGGCCTCGAC TATCACCATG CAGTTAGTCA AAAATATTTT TCTTTCCAAA 
GAACGAACTT TTAACCGTAA ACTCTCAGAA GCCGTTCTAG CCATTCGTGT CGAACAGGTG 
TTTGATAAAG ATAAAATCTT GGAAATGTAC CTCAATAACA TCTATTGGGG ACACAATAAC 
TACGGTGTTC AAACTGCTGC TGAAAGCTAT TTTAATAAAC CCGCTTCTAA ATTAACTTTA 
GCCGAATCTG CCTTAATGGC TGGACTGATT CAAGCCCCCG AAACCTATAG CCCTTTTACT 
AACTATACTA AATCTAAACA AAGACAAGCC GTTGTTTTAG ACCGCATGGC CGAAATTGGC 
TGGATAACAC CCCAAGAAGC CGAAGTCGCA AAAAATGCCC CTCTAAAAGT AGGTAAACCC 
ACCGCTTGGC AAGGAAGCAA ACTCCCCTAT GTGACGGATA CTGTCATGGA AGAGTTAGAA 
GCCAAGTTCG GCAAAGAAGC CACCCGCAAA GGGGGAATGC GAGTTCAAAC CACTGTCGAT 
TATTTTGCTC AAACCAAAGC CCAAGAAGTC GTAGAACAGG GCTACCGTAA CCTACGGGGA 
CGGGGTATCT ATGCTAGAAA TCTGCAAATC GCTTTGGTAG CTGTTGATCC TCGTACCCAT 
TTTATCAAAG CGATCGTCGG GGGGGTCGAT TACGAGAAAA GTCAATTAAA CCGCGCGACT 
CAATCCCGCC GTCAACCCGG GTCATCCTTT AAGTCTTTTG TTTACTATAC CGCCTTTGCC 
ACAGGAAGAT ATACCCCTGA ATCCGTGGTT AACGATAGTC CTGTTAGCTT CCGAGATGGT 
AGCGGTTTAT ATACCCCGAA AAACTACGGC GGAGGGTATA GCGGACCGAT GTCAATTCGG 
ACAGCTTTAA TTCAATCTCG CAACGTTCCG GCGGTGGTTA TCGGTAGAAA GGTTGGTGTA 
GATAAAGTCA TTGAAGTTTG TCGTCGTTTG GGGATTGACA GTCCTCTACA ACCAGTCACC 
TCCCTACCCT TGGGGGCGGG TGATATTACG CCTTTAGAAA TGGCGGCCGC CTATGCTACC 
TTTGCTAGTA ATGGTTGGCA TTCTGAACCC ACGATTATCC TACGGGTGAC GGACAGCCGA 
GGCAATGTTT TATTAGATAA TACCCCTAAA CCCCAATTAG TCCTTGATCC GTGGTCGGCT 
GCTAGTACAA CCTCAGTATT ACAAGGGGTG ATTACCAGTG GAACTGGAAG GGCTGCCAAT 
ATTGGTCGTC CGGCTGCGGG TAAAACGGGA ACGACTGACT CAGAACGGGA TGTTTGGTTT 
GTCGGCTATG TCCCTCAATT AGCCACGGCG GTTTGGATTG GGGATGATGC TAACCGAGTC 
CTGGGACGAG GAGTAACGGG AGGGGGTAAT GCTGCTCCCA TTTGGCGCAA TTTTATGCAG 
CAAGCCCTAA AAAGTGAACC CGTTAAACAC TTCCCCGCCG CTTCTAAATA CCCCCGTCCT 
AAGGCAAAAT AA 

 

Protein sequence

MSSSTIRQQP KPQKSPNPKP SFGQGVIKVA GGTALGLAML GSSIIAGGLV GLAISFRNLP 
DVRILNNYAP TETSYIYDVK GRLLSRLHEE ANREVVSMED ISPDLKRAVL AIEDSHFYYH 
HGINPTSIGR AIWVNYRSGG VVEGASTITM QLVKNIFLSK ERTFNRKLSE AVLAIRVEQV 
FDKDKILEMY LNNIYWGHNN YGVQTAAESY FNKPASKLTL AESALMAGLI QAPETYSPFT 
NYTKSKQRQA VVLDRMAEIG WITPQEAEVA KNAPLKVGKP TAWQGSKLPY VTDTVMEELE 
AKFGKEATRK GGMRVQTTVD YFAQTKAQEV VEQGYRNLRG RGIYARNLQI ALVAVDPRTH 
FIKAIVGGVD YEKSQLNRAT QSRRQPGSSF KSFVYYTAFA TGRYTPESVV NDSPVSFRDG 
SGLYTPKNYG GGYSGPMSIR TALIQSRNVP AVVIGRKVGV DKVIEVCRRL GIDSPLQPVT 
SLPLGAGDIT PLEMAAAYAT FASNGWHSEP TIILRVTDSR GNVLLDNTPK PQLVLDPWSA 
ASTTSVLQGV ITSGTGRAAN IGRPAAGKTG TTDSERDVWF VGYVPQLATA VWIGDDANRV 
LGRGVTGGGN AAPIWRNFMQ QALKSEPVKH FPAASKYPRP KAK