| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5639 |
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| Symbol | |
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| ID | 7112966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011738 |
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| Strand | + |
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| Start bp | 17124 |
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| End bp | 18725 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643483936 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_002380945 |
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| Protein GI | 218442625 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000755047 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTTT GGAAAAAAAT TATCATAGTG CTACTGGTAC TTATGCCAAA AGACGTATTA
GCTCAACAAC AGAGGACTAA TGGGTTATCT GCACCAGTGG TTAGAGAAAA AATAGAACCC
TCGAATCTTT CTCTTTTCGT GCTTAAAAAA GTGTATTTGC ATAATTCGGA GGTATTCACC
TCTCAAGAAG TTAATGAAAT TGTGAAAGAT TATTTAGGTA AACCCGTAGA TCTAAGCGAT
CTCTTAAAAA TTCAAGAACT TTTAAGCCAG AATTATCTGA AAAAGGGTTA TTTTTTATCC
CGCGTTCGTT TGGAAACTCA AAACATTGAT GTTGATAAAG GAGTTGCCTA TTATTCGGCA
CTCGAAGAAT CCGTAGACTT ACAAATTCAA TCTCATGGAC TGCGGAGAAG TTACATCAGC
GCTCGTATTA AAAGATTTTT GCATCCTCCC TTAAGCCAAA AAAATTTATA TGAGGCGATC
AACCTTCTTC GTCAAAATCC CTTAATTGAG GATTTAAAGG TAGATTTGTG GCAAACAGAA
GGGAATAAAT CCATTTTATC TCTAGATATA AAAGCAGCCC CTCAATGGAA TTTATCATCT
GAAGCTAATA CGGATGAAAA TGACGATGTA GGAGCAAGCG GAATTCTTGT TTCGCTCTTA
AACCGTAATC TAGCGGGTGG GGGAGAATCA ATTTTGACCG AATATAAAGT CACTGAAGGG
TTAGAACGGT GGTTAATTTC TTTGTCTATA CCGGTTAACT CAAAAGAAGG AAGAATAGAA
CTAGCTTATC AGCAAGCTAA TTCTCAACTA ATTAACGGAT TTTTTGAACC TTTTGATATT
CGCAATGATA GCTCGATTGT TTCCGTAGGA TTTTCTCAGC CGTTAATTCT CACTCCAAAT
TCAACCTTTG AACTAGGATT AAGTATTGAA CAACGGGAGA GCCGGAGCTT TGTTTTGGAT
GATATATTAT TTTCACAAGC AGAACTGAGT GCATTGCGAT TTAAACAAGT TTACCTAAAG
CGGTCAACTC AAGACGCTTT AATTGGAATT TCCCAACTGA GCTTAGGATG GGTTAATTTC
AATCAAGGGC AAGAAAACAA CTCGAATTTT TTCCACTGGC AGGGACAGTT ACAATGGGAG
CGAAATCTCA ATAATGCCAA TACCAAATTC TATGTTCGTC TTGCCAGTCA AATGGCATCT
AAATCTTTAC CTCCTTTTGA AGGGTGCGCG ATCGGTGGGC GAAACGGAGA TCGGTTCAGT
TTTGGAAATA ATAATCGAGC TTACACAACT AACGGACGAA TAGGGGATAG CTGTCTAGCA
GCAACAATGG AGTTGCGCTT TCCCGTATAT GTGGATGACA ATGGGCAATT GCAACTCGTT
TTATTTGGAG ATTTGGGCTA TGTTTGGAAT CTTGGGGCGC AGCAACCGCT TTCCCCTCAA
TTTCTCGCTT CAACAGGAGT TGGTTTTCGG TATCAATTAA ATGATTCGTT GTTAGTTCAA
GTTAATTACG CTATTCCTTT ATCAGGAGTT GGAACATTAA CGGGAGATTC CTTAAAACGC
CAGGAAGTAT CTGGGTCAGT TCGTTATGGA GTTAAATTTT AA
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| Protein sequence | MKLWKKIIIV LLVLMPKDVL AQQQRTNGLS APVVREKIEP SNLSLFVLKK VYLHNSEVFT
SQEVNEIVKD YLGKPVDLSD LLKIQELLSQ NYLKKGYFLS RVRLETQNID VDKGVAYYSA
LEESVDLQIQ SHGLRRSYIS ARIKRFLHPP LSQKNLYEAI NLLRQNPLIE DLKVDLWQTE
GNKSILSLDI KAAPQWNLSS EANTDENDDV GASGILVSLL NRNLAGGGES ILTEYKVTEG
LERWLISLSI PVNSKEGRIE LAYQQANSQL INGFFEPFDI RNDSSIVSVG FSQPLILTPN
STFELGLSIE QRESRSFVLD DILFSQAELS ALRFKQVYLK RSTQDALIGI SQLSLGWVNF
NQGQENNSNF FHWQGQLQWE RNLNNANTKF YVRLASQMAS KSLPPFEGCA IGGRNGDRFS
FGNNNRAYTT NGRIGDSCLA ATMELRFPVY VDDNGQLQLV LFGDLGYVWN LGAQQPLSPQ
FLASTGVGFR YQLNDSLLVQ VNYAIPLSGV GTLTGDSLKR QEVSGSVRYG VKF
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