| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5218 |
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| Symbol | |
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| ID | 7109550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5792486 |
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| End bp | 5794228 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643483425 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002380434 |
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| Protein GI | 218442105 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0126538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC CCTTAAGAGT CCTAATCGTT GAAGATTTTC CTGATGATGT CGAGTTATTG
TTATTTGAAC TCCAAGAAGG TGGGTTTTTC CCTATCCACT ATGAACGGGT TGATAGCGCA
GAAGCGATGA GAACTGCCCT TGAAGCTCCC CAAGGTTGGG ATATCATTAT TTGCGATCAT
TGTATGCGTA ATTTTAATTC ATTAGACGCT TTAGCCCTAA TGAAAGAAAA AGGCTTAGAT
ATTCCTTTTA TTATTGTTTC CGGAACTATC AGCGAAGCTC TAGCAGTGAG TGCCATGAAA
GCAGGGGCAC AAGATTATGT TTATAAGGGG AATTTAACTC GACTGATTCC TGCCGTTTCT
AGAGAGGTAA AAGAAGCTAA AGTTCGTCAA GAACATCGAA AAACTCAAGA AAGATTAAAG
TATTTAAATT CTTATGATCA TCTAACGGGT TTACCGAATC GGAATTTTTT TCTCAATAGT
TTGCGAGAGT GCATTGACAA CAATCAAAAG CATTCAGGAG AACTCTTTGC TGTTTTATTT
CTCAATGTTG ATCGCTTTCA AATGATAAAA TATAGCTTAG GGCAAGCCCT AAGTGAACAA
TTTCTGATTG CCACAGCCCA ACGGTTGCAA GAGTGGCTCA AATCTCCCCA TCTCTTGGCA
CGAATGAGAG GAGATGAGTT TATTATTCTG TTATTAGATA TTAAAGATGC TCGACAAGCT
TTAGATTTAG CAGATGAAAT TCATCAAGCT TTTTCAAAAC CGTTTAATCT CGATGGAAGG
GTAGTCTATT CTACCAGTAG TATTGGCATT GTTTTAGGCA ATATCGACTA TCAAAATCCT
GAAGATTTTT TACGAGCAGC AGACATTGCT AAACATCACG CTCAGAAAAA GACAACCAGT
CGGTCTGTAT TGTATGATGC CAGTATGCAA AGACGAGTCA GTGAACGATT ACAGTTAGAA
ACGGATTTAC AACAAGCGAT TCAAAATCAA GAATTATATT TACACTATCA GCCCATTGTT
TCTTTAGAAA CCGGCGAAAT TACAGCTTTT GAAGCTTTAT TGCGTTGGCA TCATCCGACT
AGAGGGCTAA TCTCTCCAGC CGAGTTTATT CCTTTAGCAG AAGAAACTGG ATTAATTATT
CCTTTAGGAC AATGGGCTTT ATCACAAGCC TGTCAACGAT TAAGATTATG GCAAGAAGAA
TTTCCTCATT TATCTGCTCT AAGTATGAGC GTAAATTTAT CAGGAGTTCA GTTGTCTAAT
CCGGATTTAA TTAAACAGAT TGATGAATTA TTGGAATCCG TTGGCTTATG TGGAGATAGC
TTAAAATTAG AGATTACAGA AAGCTTTTTG ATGGAAAATA TGATAGAAAA TCCTTTGGCT
GCCAATCAAA TTTTAAAACA ACTCAAAGAA AGACAAATTA AATTATGTAT AGATGACTTC
GGGACAGGTT ATTCTTCTCT CAGTTATTTA CATCATTTAC CGATTGATAT TCTTAAAATA
GATCGCTCTT TTCTGAATTC TAAAACTGAA AAAGGTAAAA ATTCTGAAAT TGTTAAATCT
ATTGTTAATT TAGCCAAAGA TTTAGGATTA GCCTTAGTTG CTGAAGGCAT CGAAACGGAA
AAACAGTTAA CCATGCTTAA ACAATTGCAA TGTGATTATG GGCAAGGCTA CTTATTTGCT
AAACCTTTAG ATGTTCATAC CCTTTATCAA TTATTTGATC AACAAGCTAA GTCTCTTAAT
TAA
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| Protein sequence | MSQPLRVLIV EDFPDDVELL LFELQEGGFF PIHYERVDSA EAMRTALEAP QGWDIIICDH
CMRNFNSLDA LALMKEKGLD IPFIIVSGTI SEALAVSAMK AGAQDYVYKG NLTRLIPAVS
REVKEAKVRQ EHRKTQERLK YLNSYDHLTG LPNRNFFLNS LRECIDNNQK HSGELFAVLF
LNVDRFQMIK YSLGQALSEQ FLIATAQRLQ EWLKSPHLLA RMRGDEFIIL LLDIKDARQA
LDLADEIHQA FSKPFNLDGR VVYSTSSIGI VLGNIDYQNP EDFLRAADIA KHHAQKKTTS
RSVLYDASMQ RRVSERLQLE TDLQQAIQNQ ELYLHYQPIV SLETGEITAF EALLRWHHPT
RGLISPAEFI PLAEETGLII PLGQWALSQA CQRLRLWQEE FPHLSALSMS VNLSGVQLSN
PDLIKQIDEL LESVGLCGDS LKLEITESFL MENMIENPLA ANQILKQLKE RQIKLCIDDF
GTGYSSLSYL HHLPIDILKI DRSFLNSKTE KGKNSEIVKS IVNLAKDLGL ALVAEGIETE
KQLTMLKQLQ CDYGQGYLFA KPLDVHTLYQ LFDQQAKSLN
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