Gene PCC7424_5188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5188 
Symbol 
ID7109520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5762161 
End bp5763609 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content35% 
IMG OID643483396 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002380405 
Protein GI218442076 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000000000262234 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAACACA GAGTTTTTAA CTGTTTTAAA CCTATTGCTT CTTTAGGGCA GAAACTTACC 
CCTTCTCATC GTGGCAGTTT AATTATTTCT ATTCCGGTTA TATGTCTATT TACTTCTTTA
GGAACATTTG CATGGCTAAA AAATAGTTTA ATTGAAGATG AAACCTGGGT ACAACATACT
CAAAAAGTTC GATTAGAAAC TAAACAATTG CTCACGGCTT TAGTTAATGC TGAAACTGGG
GTACGAGGAT ATGGAATGAC AGGCCGATCG GATTTTCTTG ACCCTTATCA TACTGCTCTA
AAAATTATTC CTCAATCTTT AAACGAATTA GAAATATTAA TTAAAGATAA CCCTCAACAA
ACTCAACAAT TGCAAAAGAT TCGTCAATTA GTCACTCAAA ATTTAGAGAC TATGGATAAA
AAGGTTCGAT TCCTCCAATC TTTATCCGAA AAAAATGATA AATTTAGGCT TAATGATTCT
CCGTCACAAT TATATGATTG GTTAGAAGAA GGCAAAGTTT TAATGGATTC GACAAGAGAA
GAAATTAATA TTTTTGCAGC AGAAGAAGAA CGTCTTTTAG AAGTTCGTCA AGATCATTTA
GAAAGTCAGC GTCAAACGAC ATCAATTATA TTTTATTTCT TAGCCTTTAC CGGGACGATT
TCAGGTTTTT TAGCTATACA TTTATTTCGA GAACTTGAGC TAGACCGTAA AGAAAGAGAG
AAAAATTTAC AAGCTACCAA TCAACAATTA AGTCTAGTTT GTGAACAATT ACAACGGTTT
ACAGCTAATG CTTCCCATGA ATTACGCGCT CCCTTAGCCG CTATATTAAG TAATGCTCAA
ATGGGACTTT TAACGCCAAA TCAAGCCCAA TCTCGTCACA GATTAGAAAA AGTTGTCGAG
TTAACTAAAT CCATGAGTGT CTTAGTCAAT GATTTATTAT TTCTTGCCCG TTATGAAGGA
GTAAATTTAA GACAAGAGTT TAAAGTTGTT GACTTAGTGA ATTTATTACA ACCCCTCACT
CAAGAATGGC AAAATCGCGC TTATTCTTAT AATTTAACCT TAACCAGTTA TTGGCCACAG
TCTTCTATTA TGGTAATGGC TGAAAGTAAT CTTTTACGAC AAGCTATCGT TAATCTTCTG
AGTAATGCCT GTCGCTATAC TCCGGCTGGA GGGAGCATTT ATTTTAAAGT TTTTTGTCAA
AATTTAAAGG CAATCGTTGA AGTAGAAGAT AATGGAATTG GTATTCCGAC TCAAGATTTA
CCTCATATTT TTGAGCGGTT TTACCGAGTT GATACAATGC GCTCACGTTC TACAGGTGGA
TTTGGTTTGG GGTTAGCAAT TACAAAACAA ATTATAGAAG CACATGGGGG ACATATTGAT
GTGAGTAGCA CTCTTGAAAA AGGGACAATT TTTCAAATCA TTCTACCGGT TTTGGGAGTT
CATACTTAA
 
Protein sequence
MKHRVFNCFK PIASLGQKLT PSHRGSLIIS IPVICLFTSL GTFAWLKNSL IEDETWVQHT 
QKVRLETKQL LTALVNAETG VRGYGMTGRS DFLDPYHTAL KIIPQSLNEL EILIKDNPQQ
TQQLQKIRQL VTQNLETMDK KVRFLQSLSE KNDKFRLNDS PSQLYDWLEE GKVLMDSTRE
EINIFAAEEE RLLEVRQDHL ESQRQTTSII FYFLAFTGTI SGFLAIHLFR ELELDRKERE
KNLQATNQQL SLVCEQLQRF TANASHELRA PLAAILSNAQ MGLLTPNQAQ SRHRLEKVVE
LTKSMSVLVN DLLFLARYEG VNLRQEFKVV DLVNLLQPLT QEWQNRAYSY NLTLTSYWPQ
SSIMVMAESN LLRQAIVNLL SNACRYTPAG GSIYFKVFCQ NLKAIVEVED NGIGIPTQDL
PHIFERFYRV DTMRSRSTGG FGLGLAITKQ IIEAHGGHID VSSTLEKGTI FQIILPVLGV
HT