Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5165 |
Symbol | murD |
ID | 7109497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5732988 |
End bp | 5734337 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643483374 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_002380383 |
Protein GI | 218442054 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0000147173 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCAAAG CTACCATTAT CGGACTCGGA AGATCGGGAA TTGCAGCCGC AAGAGTATTA AAAGGGGACA ATTGGGAGGT TACGTTAAGC GATCGCTCTA ACAGTCCCAA TTTACAGCAA ACTCAAGGCC AACTACAACA AGAAGGAATA ACCGTTAAAC TGGGAGACAG TTTTACCCTC AACCCCGAAG ATTTACCGAA TTTGATCGTG GTGAGTCCGG GAGTGCCTTG GGATATTCCC GTTTTAGTCG AGGCTAGAGA TCAAGGCATT GATACCATAG GAGAATTAGA ATTAGCGTGG CGCTATCTTA ATGGTTGTTC ATGGGTAGGA ATAACGGGAA CTAACGGCAA AACCACCACA ACCGCCCTGA TAGCAGCTAT TTTCAAAGCC GCAGGATTGA ACGCTCCGGC CTGTGGTAAT ATTGGCTATG CCGCCTGTGA ATTAGCCTTA ACTCAACAGT CTTACGATTG GATTATTGCG GAAATTAGTA GCTATCAAAT CGAATCTTCT GCGACTTTAT CGCCAAAAAT TGGCATTTGG ACAACCTTTA CCCCCGATCA TCTCGAACGT CACAAAACTC TAGACAATTA TTATCAGATT AAAGCGTCTT TACTCAGTCG TTGTCGCCGT CAAATTTTCA ACGGGGATGA TCCCTATTTA CATAACATTG GGTTGAGTCA ATGGAAAGAT AGTTATTGGA CAAGTGTAAA AGGAAAAGAG GCTTTATTGT GCGATCCTTC TAAAGGAATT TACCTTCAGG ATAACTGGAT AGTTGCTTTT GGGGAATTAA TTGCTCCGAT TAATTTATTT AAAATGGTTG GAGAACATAA CCAACAAAAT TTATTAATGG CTGTTGGGGC AGCTAGATTA GCCGATATTA ATAAAGATGC GATCGCTGAA GCTATGGCGA CTTTTTCGGG TGTTCCTCAT CGCTTAGAAT TAATTCGCAC AATTGCCGGT GTAGATTACA TTAATGATAG TAAAGCGACT AATTATGATG CGGCTCAAGT GGGATTATCT TCGGTTGAAG CTCCTGTTAT TTTAATTGCC GGTGGGCAAG CTAAAAAAGG GGATGATACA GAATGGATTA AATTGATTAA AGCGAAAGTC GCAACAGTAT TATTAATAGG AGAAGCCGCC TCAACTTTTG CTCAACGATT ACAAGAATCA GATTATTATG CTTATGAAAT TGTAGAAACA ATGGAAAATG CAGTTGAACG ATCAGCCTCA TTAGCAACAG ATAAAGGGGT TAAAATCGTG TTATTATCGC CAGCCTGTGC CAGTTTTGAT CAATATCAAA GTTTTGAACA TCGAGGAGAT CATTTTCGGG AATTATGTTT ACAGTTATAA
|
Protein sequence | MPKATIIGLG RSGIAAARVL KGDNWEVTLS DRSNSPNLQQ TQGQLQQEGI TVKLGDSFTL NPEDLPNLIV VSPGVPWDIP VLVEARDQGI DTIGELELAW RYLNGCSWVG ITGTNGKTTT TALIAAIFKA AGLNAPACGN IGYAACELAL TQQSYDWIIA EISSYQIESS ATLSPKIGIW TTFTPDHLER HKTLDNYYQI KASLLSRCRR QIFNGDDPYL HNIGLSQWKD SYWTSVKGKE ALLCDPSKGI YLQDNWIVAF GELIAPINLF KMVGEHNQQN LLMAVGAARL ADINKDAIAE AMATFSGVPH RLELIRTIAG VDYINDSKAT NYDAAQVGLS SVEAPVILIA GGQAKKGDDT EWIKLIKAKV ATVLLIGEAA STFAQRLQES DYYAYEIVET MENAVERSAS LATDKGVKIV LLSPACASFD QYQSFEHRGD HFRELCLQL
|
| |