| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5153 |
|---|
| Symbol | |
|---|
| ID | 7108052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5721028 |
|---|
| End bp | 5722095 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643483362 |
|---|
| Product | TrkA-N domain protein |
|---|
| Protein accession | YP_002380371 |
|---|
| Protein GI | 218442042 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.000000000053583 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTTTAGCT TTGAAGAAAA ATATCGTCGC CTAAAACAAG AATTGTTAGC AGGGTTTGTC
TTGCTGGCAG GGGTTTTTTT ATCGGGCACT CTGTGGTATC GATTTGTTGA GGAGTGGTCT
TGGTTAGATG CCGCTTATAT GACCACCATT ACCCTAACTA CAGTGGGTTT TGGAGAAATT
CAACCCCTAG AAGAACGATC GCGCCTGTTT ACCATTGTTT TAATTTTATT AGGAGTGATT
ACAATTGGAT ACATAGTCAA TCGGGTAACC GAAGCGATTA TTCAAGGGTA TTTTCAAGAA
GGGTTACGCA CAAGGCAGGA GAGACACTTG ATAGAACAGT TAAGCGATCA TTATATTCTC
TGTGGTTATG GGCGCACCGC TCGTCACGTG GCCTTAGAAT TTGAAGCAGA AGCAATTCCT
TTTATTATCA TCGAGTCTCA ACCCGAACAG GTAGAACAAG CCAAACAAAA AGGGTATATT
GTGATTCAGG GAGATGCCAC CCTCGATGCC TCTTTAATTA CTGCCAAAAT TGAAAAAGCT
ATCTGTTTAG TCTCTGCTTT ACCTTCCGAT GCGGAAAATC TCTACACTGT ATTATCCGCT
AAAACTCTTA ATCCTAAAAT TCGGGCGATC GTCCGGGCCA GTACAGAAGA AGCCGTACAA
AAGCTACAAC GGGCGGGGGC GGATGCGGTC GTATCCCCCT ACATTACTGG GGGAAAACGG
TTAGCGGCGG CGGCGTTAAG ACCCCAAGTG ATGGATTTTG TCGATGGTAT CCTCACCGGA
ACCGATCGGG CGTTCTATAT GGAAGAGTTT TTGCTCGATC CGGAGGTGTG TCCTTGTGTG
GGACAACCCT TAAAAGAGGC GAGATTAAGA TTACAGTCGG GAGCGTTAGT TTTAGCGATT
CGTCGGGTGG ATGGTCATTT AATTGCAGGC CCTACAGGAG ATACAATTTT AATGCCCGGA
GATTTACTCA TCTGTATGGG AACGGCGGAA CAATTACGGG CGCTCAACCG CTTATTAGGG
CCAATTCGTC CCTCTTCCTT ACGTCTGCCC AAATTAAAGC GAGACTAG
|
|---|
| Protein sequence | MFSFEEKYRR LKQELLAGFV LLAGVFLSGT LWYRFVEEWS WLDAAYMTTI TLTTVGFGEI
QPLEERSRLF TIVLILLGVI TIGYIVNRVT EAIIQGYFQE GLRTRQERHL IEQLSDHYIL
CGYGRTARHV ALEFEAEAIP FIIIESQPEQ VEQAKQKGYI VIQGDATLDA SLITAKIEKA
ICLVSALPSD AENLYTVLSA KTLNPKIRAI VRASTEEAVQ KLQRAGADAV VSPYITGGKR
LAAAALRPQV MDFVDGILTG TDRAFYMEEF LLDPEVCPCV GQPLKEARLR LQSGALVLAI
RRVDGHLIAG PTGDTILMPG DLLICMGTAE QLRALNRLLG PIRPSSLRLP KLKRD
|
|---|
| |