| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5146 |
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| Symbol | |
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| ID | 7108045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 5715548 |
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| End bp | 5716207 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643483355 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_002380364 |
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| Protein GI | 218442035 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 5.449200000000001e-25 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT CGATTCCCGC AACCTGGTCA ACACTTGAGG CTAAAAAAAC CCGTAGCCAA
GTGTCTCCTG ACAAACTCTC AAATTACGAT TTGATTTTAC GATGTCAGGA AGGATTGCAG
CCAGATAGAA TGGCATTTGC AGAACTTCTG CGCCGCTATC AATCTCATGT AGACAAACTT
CTATATCATT TAGCCCCAGA TTGGCAAGAT CGAGCAGATT TAGCTCAAGA AGTGTGGATT
AGAGTGTATC GCAATATCAA ACGTCTAAAC GAACCTCTCA AATTCCGGGG CTGGCTCAGT
CGAATTGCGA CCAACTTATT CTATGATGAG TTACGCAAGC GCAAAAGAGT AAGTAATCCT
GTCTCTTTAG ATGCACCCCG AAGAGTCGAT GATGGAGAAA TAGACTGGGA TATTGTTTCT
GATTATCCGT CTCCCGATGA TAATCTGGCA ACCCGTGAGT TTTACGAGCA ACTGAGACTA
GCGATCGCCG ACTTACCCGA AGCATTCCGG ACAACTATCG TTTTGCGAGA AATAGAAGGA
ATGGCATATG AAGAAATAGC AGAAATCACC GGCGTTTCTT TAGGAACTGT TAAGTCAAGA
ATAGCTAGAG CCAGAGCTAA GTTACAATCT GTGTTGCAAC CTTATTTAGG AGACAGCTAA
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| Protein sequence | MSQSIPATWS TLEAKKTRSQ VSPDKLSNYD LILRCQEGLQ PDRMAFAELL RRYQSHVDKL
LYHLAPDWQD RADLAQEVWI RVYRNIKRLN EPLKFRGWLS RIATNLFYDE LRKRKRVSNP
VSLDAPRRVD DGEIDWDIVS DYPSPDDNLA TREFYEQLRL AIADLPEAFR TTIVLREIEG
MAYEEIAEIT GVSLGTVKSR IARARAKLQS VLQPYLGDS
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