Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5132 |
Symbol | |
ID | 7108031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5697217 |
End bp | 5698563 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643483341 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_002380350 |
Protein GI | 218442021 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.000000249535 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTATG ATTGGCTAGG GCCTTTAATG TTTGTCGGGG CGTTAATTTT CCTCGCTTTT GGTTATCCGG TTGCTTTTGC CCTTGGGGGG GTGTCTATCC TCTTTGCTAT TATTGGTTTA ATAGTGGGAG TATTTGATAT TAATTTATTA ATGGCCATGC CGGCGCGAAT TTTCGGCATT ATGGCTAATT ATACTCTTTT AGCAATTCCC TATTTTATCT TTCTTGGCTC GATGTTAGAA AAAACTGGTA TTGCCGAAAG ATTATTAGAA ACGATGGGGA TTTTATTTGG AAGACTTAGA GGCGGGTTAG CGTTGGCGGT GGTTTTGGTG GGTGCATTAT TGGCGGCGAC AACGGGGGTA GTTGCTGCAA CCGTAGTGGC GATGGGGTTA ATTTCTCTGC CTATTATGTT GCGTTATGGG TATAACAAAG AGTTAGCAAC GGGGGTAATT GCCGCTTCAG GAACATTAGG ACAAATTATT CCCCCCAGTG TGGTATTAGT GGTTTTAGCG GATCAATTAG GTGTACCGGT AGGAGATTTA TTTATTGGTT CGGTAATTCC TGGTTTGTTA ATTGCAGGTG TATTTGCGGT TCATGTATTA GTTATTGCTT TTCTCAGACC AGATGTTGCC CCTCCTTTAC CGGCTGAGGT GAGAAATATT GGGGGTAAAG CGTTAGGATT ACGGATGATT CAGGTGATGA TTCCCCCGTT AATATTAATT TTATTAGTGT TAGGAAGTAT CTTTTTTGGA ATTGCTACTC CTACAGAAGC CGGGGCGGTG GGATGTGTTG GGGCAATGAT TTTGGCGGCT TTTAATCAAC AGTTAGGTTG GCTGGAATTA AAACAAGTTT GTGATGCAAC TCTTCGCATT ACCACAATGG TCATTTTTAT CTTATTTGGT TCGACGGCTT TTAGTTTAGT TTTTCGGGGG TTACATGGGG ATAGTTTTAT GTCAGAAGTG CTGACAAATT TGCCTGGAGG AGAAATCGGC TTTTTATTTA TAAGTATGAT AACGATTTTT ATTCTGGGCT TTTTTATTGA TTTTTTTGAG ATTGCTTTTA TTGTTATTCC TCTGTTTAAA CCAGTGGCAG AAACTTTAGG ATTAGATTTA GTTTGGTATG GAGTAATTGT AGGAACAAAT TTACAAACTT CCTTTTTAAC TCCTCCGTTT GGCTTTGCCC TGTTTTACCT TCGGGGTGTT GCTCCTCCAG AGATAAAAAC AGAGGATATT TATCGTGGGG TTATTCCTTT TATTTTACTA CAGTTATTAG TTTTAATCTT AATTGTGGTG TTTCCTCAGT TGGTGAGTTT TTTACCCTCT TTGATGAGTT CTAGTCCGAC GGGATAA
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Protein sequence | MAYDWLGPLM FVGALIFLAF GYPVAFALGG VSILFAIIGL IVGVFDINLL MAMPARIFGI MANYTLLAIP YFIFLGSMLE KTGIAERLLE TMGILFGRLR GGLALAVVLV GALLAATTGV VAATVVAMGL ISLPIMLRYG YNKELATGVI AASGTLGQII PPSVVLVVLA DQLGVPVGDL FIGSVIPGLL IAGVFAVHVL VIAFLRPDVA PPLPAEVRNI GGKALGLRMI QVMIPPLILI LLVLGSIFFG IATPTEAGAV GCVGAMILAA FNQQLGWLEL KQVCDATLRI TTMVIFILFG STAFSLVFRG LHGDSFMSEV LTNLPGGEIG FLFISMITIF ILGFFIDFFE IAFIVIPLFK PVAETLGLDL VWYGVIVGTN LQTSFLTPPF GFALFYLRGV APPEIKTEDI YRGVIPFILL QLLVLILIVV FPQLVSFLPS LMSSSPTG
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