| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5112 |
|---|
| Symbol | |
|---|
| ID | 7108011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5673479 |
|---|
| End bp | 5677237 |
|---|
| Gene Length | 3759 bp |
|---|
| Protein Length | 1252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643483322 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002380331 |
|---|
| Protein GI | 218442002 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.758591 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTC CTATTAAAGC TGTCTTATTA AGCCAAGATG AGAAGAATTA TAGTATAGTG
AAAAATTTAT TTACCACTAT AGACAATAAT CGCTTTGAAT TAGAGTGGAT AGTTTTAGAA
CAAACTCAGA TCAGACAAGT CATTTCTCAA AACTATCAAG TTTATTTGAT TGACGCTCAT
CTATGGATAA ACCCTAGCCA AGAACAAGCT CAAAATTTAG CTACTCTCCA AAAATACTTA
TCTCCTCTAA TTAATCAAAT TAGTCCAACT CCGATCATTT TACTAACGGA TAATTCTTTC
TTAGGAAAGG CCACCCTTGA ACTAGGAATA GAAGATTATT GGGATAAAAA TGAATTAACT
CCATCAATCA TTGAGCGATC GCTACGTTTA ACCCTTAAGA ATACACAGCA AAATGGTCAT
CAAGAGAGAG TTTTAGAAGA AAACAAATTA AAGCAAAAAA TTAGACAATT AGAGGAATAT
AAAAATAAGT ATGAAGCAGG GATTGAAGCG AGGGAAGAAA TTTTTTATGA ATGGAACTCT
CAAACTAATC AAATATTTTG GCGAGGAAAT CTCGAAGAAA ATTTAGGCTA TTGTGCTAAG
GAAATTATTA ATCATTTAGA CTGGTGGAAT GACTTAATAC ATCCTGAAGA TCAACTAAAA
TTCGCTGTAG CCATTGAGCA AATGAGCGAA ACGAGAGAAC CGATTAAGCG AAACTATCGA
ATAAGACGAA AAGATGGAAA GTATATTTTA TTAGAAGATC TAGGCAAATT TTTTAGGGAT
AGTCAAGGTA AATGGGTGAG AATGGCGGGT TTCATCAAAG ATATTACCGA GAGTAACCAA
GTTAAAGAAA GGCTCAAAAA ACAGGAGCAA TCCTTTAAAA ATTTAGGAGA AAATATACCA
GATGCAGTGA TTCGACTAGA TCAAAATAAT CGCTATTTAT ATGTTAATTC CACTGTTGAA
AAAATTACCC GTCTTCCTTC AGAAAAAATT CTCGGTAAAA CCTTTAAAGA AATAGGTTTA
CCAGACTCGG TAGTCAATTT ATGGACTCAA ACCCATCAAG AGGTTTTTGA AAGCGGTGAA
AAGCGAATCA TTGAATATGA ATATCCTTCT GTTGAAGGGA AAACTTATTG GCAGAATCAA
ATTGTTCCAG AATTTAATCA AAAAGGTAAA ATAGAAAGCC TTTTAATTAT AGGTCGAAAT
CTTACTGAGG GAAAACAAAT AGAAGAAGCT TTACGAACTA ATGAAGAACA ACTTCGGCTT
TTAATGGATT CTTTACCCGT TTGTATTGCC TATACTGATG CCGAACAACG ATATCAATTT
ATTAATAAAA ATTATGAGCG TTGGTTTGGT CATAAAAAAG AAGAAATTTT TGGGAAAACC
CTTCAAGAAG TTTTAGGACA ACAAGCTTAT CAAGTCGTTC GTGATAATGT AGAACGAGCG
TTAAGAGGGG AACTGGTTAC TTATGAAACA ACAGTGCCTT ATCAAGATGG AGGAAGTCGT
CATGTTTTAG GGAATTTAAT TCCTGATTTA GGAGAAAATA GTCAAATCAA AGGATACTAT
GCTCTAATTA CTGATATTAG TGAACGCAAA CGAATAGAAG AAAAATTACG TTATCGTCTC
CTTTTAGAAA CAGCCATTAC TTTAGTCTCT AAAGAGTTAG CGACTTATGA ACAGGTTGAT
TTTAAACGAA TTTTACAAAT TTTAGGAGTA GCAGTTAAAG CGAATCGGGT CTACCTACTC
CGTTTTTATA AAAATGGGAC ACAAGCGAGT ATGATTCATG AATGGTGCGC TCATCATATT
CACCCTAAAC TTAAACAATT TCAACAGATT AATGTATCAA AGTCTTCTTG GTGGTTAACA
CAATTACAAC ACCAAAAAAA GGTCTTTTAT ACTAATATAG ATGACTTATT AGCTGAAACC
GAAGAAAGTT TAACATCTAA GGGAGTTAAT TCAGGCGTAG GGATTCCGAT TTATCATAAA
TTTGGTAAAT TATGGGGACA AATTGGCTTT GATAGTATAG GACAGACGCT GAAAATTTCT
CCTGAAGAAG ATAGTCAATT ATTGCAAGTG GTGGGGGATC TTATTTATCG CTATTATGAA
CGAATAATGG CACAGGAAAA ATTACAAGCT TCTGAATCTC TTTATTCAAG TATTTTTAAT
CATTCTGCTG ATGCCATTTT TTTAGTCAAG GTTTTACCAG AGGGTGAATT TATTTATGAA
ACTGTCAATC CTGCTTATGA ACAAGCTACA GGATTTTTTT TAGAGCAAAT TATCAAAAAA
AAACCGAGAG ATATTTTCCC TCTTAGTATC GCTACTCAAA CAGAACAATG GTATAGAACC
TGTGTGAAAT TAAAAGAAAC CTTGTTTTAT GAAGAAACCT TAGAATTACC GGTTGGAACA
AGAATTTGGC GCACTCATTT AGTTCCTATT GCTAATTCTC AAGGGGAAAT AGTGACTATA
CAAGGAAGTT CAAGAGATAT TACAGAAGTT CGTCAAGCCA TTGATGAACA AATTCGCTCT
GCCAAATTTC AGCACTTATT AGCGTCTTTA ACGATTAAAA TTCGTCAACT TTTCCAAATT
GAAGAAATTT TAGAAACCGC CGTTAAAGAA ATTCAAACGA CTTTAAGTGC AGATAGAGTT
TTATTTTTAA AACTTAATTC TCAGGGAAGC GGGAAAGTAG TTTATGAATC GGTAGTTGAT
GGTTTCCCCA GTTTGTTAAA TCGAGTATAT GAGGATGATT GTTTTGTTCA TTATTATCAA
ACTCAGTATG ATTTTGGAGA AATTAAAGTC TGTTCTAATA TCAATGAAGA AAACTTTCAA
GACTGTTACC GAGAATTATT ACAACAGGCT CAAATACAAT CTTATTTGAA TTTTCCTATT
ATGATTTATC AAGATTCTCA AGACTCAAAG AGTGAGATAT TATGGGGAAT TTTATCTGTA
CAACAGTGTA GAAATTATCG TCAATGGACA ACCGATGAAA TTGATATTCT TAAACAAATT
ACTACTCAGC TAAGTATTGC CCTCAAACAA GCTCAATTAA GAAAACAAGA AATGGAGCAA
AGACAAGAAC TAGCCCGTTC TAATCAAGAT TTAGAACAGT TTGCTTATAT TGTTTCTCAT
GATTTACAAG AACCTTTAGG AATTATTTCT AGTTATGGAC AATTACTACA CCGCCATTGT
CAAAAACAAT TAGATCCTAA AGCAGAAACC TATATTGACA GAATGCTCAA TTCTGTTAAA
AGAATGCGTC AACAAATTGA AGATTTATTA CAATATTCCC GAATCGGAAC TCGAAAACAA
ACCCTTCAGT TAATTGATAG TCATTCAGTT CTTAGACAAG CCATCGCTAA CTTAGAAATT
CCCATTAAAA AACATAACGC TCAAATAGAG ATCAATTCCT CCTTACCTAA CTTAAGGGTT
GATCCTTCAC AATTAAGACA ATTGTGGCAA AATTTAATTA GTAATGCCAT TAAATACCAT
CAAAATATTC CTCCTGTTAT TAAAATTAAT TGTCAACGAC AAAAAGATGA GTGGTTATTT
TCTATTCAAG ATAATGGGAT TGGAATTAAC CCCCGATATT ATGAGCGAAT TTTTCAAGTT
TTTCAACGCT TACATACTCA AGAAGATTAT CCGGGTACAG GAATTGGATT AGCGATTTGC
CAGCGTATTG TTCATCGTCA TGGAGGACGT ATTTGGGTAG AGTCAGAATT AGGTCAAGGG
TCTACTTTCT ATTTTACTAT TGCTGACAAT AAAGACTAA
|
|---|
| Protein sequence | MNTPIKAVLL SQDEKNYSIV KNLFTTIDNN RFELEWIVLE QTQIRQVISQ NYQVYLIDAH
LWINPSQEQA QNLATLQKYL SPLINQISPT PIILLTDNSF LGKATLELGI EDYWDKNELT
PSIIERSLRL TLKNTQQNGH QERVLEENKL KQKIRQLEEY KNKYEAGIEA REEIFYEWNS
QTNQIFWRGN LEENLGYCAK EIINHLDWWN DLIHPEDQLK FAVAIEQMSE TREPIKRNYR
IRRKDGKYIL LEDLGKFFRD SQGKWVRMAG FIKDITESNQ VKERLKKQEQ SFKNLGENIP
DAVIRLDQNN RYLYVNSTVE KITRLPSEKI LGKTFKEIGL PDSVVNLWTQ THQEVFESGE
KRIIEYEYPS VEGKTYWQNQ IVPEFNQKGK IESLLIIGRN LTEGKQIEEA LRTNEEQLRL
LMDSLPVCIA YTDAEQRYQF INKNYERWFG HKKEEIFGKT LQEVLGQQAY QVVRDNVERA
LRGELVTYET TVPYQDGGSR HVLGNLIPDL GENSQIKGYY ALITDISERK RIEEKLRYRL
LLETAITLVS KELATYEQVD FKRILQILGV AVKANRVYLL RFYKNGTQAS MIHEWCAHHI
HPKLKQFQQI NVSKSSWWLT QLQHQKKVFY TNIDDLLAET EESLTSKGVN SGVGIPIYHK
FGKLWGQIGF DSIGQTLKIS PEEDSQLLQV VGDLIYRYYE RIMAQEKLQA SESLYSSIFN
HSADAIFLVK VLPEGEFIYE TVNPAYEQAT GFFLEQIIKK KPRDIFPLSI ATQTEQWYRT
CVKLKETLFY EETLELPVGT RIWRTHLVPI ANSQGEIVTI QGSSRDITEV RQAIDEQIRS
AKFQHLLASL TIKIRQLFQI EEILETAVKE IQTTLSADRV LFLKLNSQGS GKVVYESVVD
GFPSLLNRVY EDDCFVHYYQ TQYDFGEIKV CSNINEENFQ DCYRELLQQA QIQSYLNFPI
MIYQDSQDSK SEILWGILSV QQCRNYRQWT TDEIDILKQI TTQLSIALKQ AQLRKQEMEQ
RQELARSNQD LEQFAYIVSH DLQEPLGIIS SYGQLLHRHC QKQLDPKAET YIDRMLNSVK
RMRQQIEDLL QYSRIGTRKQ TLQLIDSHSV LRQAIANLEI PIKKHNAQIE INSSLPNLRV
DPSQLRQLWQ NLISNAIKYH QNIPPVIKIN CQRQKDEWLF SIQDNGIGIN PRYYERIFQV
FQRLHTQEDY PGTGIGLAIC QRIVHRHGGR IWVESELGQG STFYFTIADN KD
|
|---|
| |