Gene PCC7424_5090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5090 
Symbol 
ID7107989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5653996 
End bp5655444 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content48% 
IMG OID643483300 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_002380309 
Protein GI218441980 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCTA CAACAGAACA AACAGTCGGT AAAATTACTC AGGTCATCGG CCCCGTCGTT 
GACGCAGAAT TTCCCAGTGG CAAACTGCCT CGGATTTACA ACGCCTTAAC AGTTAAAGGC
ACAAATCCCG CCGGAGCAGA AGTGAATATC ACCTGCGAAG TCCAACAACT CCTCGGTGAT
AACCAAGTGC GGGCAGTAGC CATGAGCAGC ACAGACGGCT TAGTGCGGGG GATGGAGATC
ATTGATACAG GAGCGCCGAT TAGTGTTCCT GTGGGCAAAT CTACCCTAGG TCGGATTTTC
AATGTTTTAG GTGAACCAGT TGATGAAAAA GGGTCTGTAA ACGTTAATGA AACCTTTCCG
ATTCACCGTC CAGCCCCTAA ATTAACAGAT TTAGAAACCA AGCCCAAAGT TTTTGAAACC
GGGATTAAGG TGATTGACTT GCTCACCCCC TACCGTCAAG GCGGAAAAAT TGGTCTGTTT
GGCGGAGCCG GTGTGGGTAA AACCGTTATT ATGATGGAGT TGATCAACAA CATCGCTATT
CAACACGGGG GTGTATCCGT GTTTGGTGGT GTGGGCGAAC GGACTCGGGA AGGAAATGAC
CTCTACAACG AAATGATCGA ATCTAAGGTT ATTAACCCCG ATAACCCCGA AGACTCCAAA
ATTGCTCTCG TTTATGGTCA GATGAATGAA CCCCCAGGCG CGAGAATGCG GGTAGGTCTA
TCGGCTCTGA CTATGGCTGA ATATTTCCGA GATGTAAACA AGCAAGACGT ACTGCTGTTT
ATTGATAATA TCTTCCGCTT CGTACAAGCC GGCTCTGAAG TATCCGCGCT CTTAGGTCGG
ATGCCCTCGG CGGTAGGATA TCAGCCCACC TTGGGGACAG ACGTAGGAGA CTTACAAGAG
CGGATTACCT CTACTAAAGA AGGCTCAATT ACCTCCATTC AAGCGGTGTA TGTTCCTGCG
GACGACTTAA CCGACCCCGC ACCGGCGACA ACCTTCGCTC ACTTGGATGG AACAACCGTA
TTATCTCGGG GGCTAGCTTC TAAAGGGATT TATCCAGCAG TAGATCCTTT AGACTCTACC
AGCACCATGT TACAGCCAAA CATTGTCGGA CAAGAACACT ACAAGACGGC TCGCGCGGTT
CAATCCACCT TACAACGGTA CAAAGAACTA CAGGATATTA TCGCTATCCT CGGTCTAGAT
GAATTATCCG AAGAAGACCG TCAAACCGTT GACCGGGCAA GAAAGATTGA GCGCTTCCTG
TCTCAGCCGT TCTTCGTTGC TGAAGTCTTT ACCGGCTCAC CCGGTAAATA CGTCACTTTG
GAAGACACCA TTAAAGGATT TAACATGATT CTCAATGGAG AATTAGACGA TCTTCCTGAG
CAAGCGTTCT ACATGGTCGG TAATATCGAC GAAGCCATCG CTAAAGCTGA AAAACTCAAA
AAAGGCTAA
 
Protein sequence
MVATTEQTVG KITQVIGPVV DAEFPSGKLP RIYNALTVKG TNPAGAEVNI TCEVQQLLGD 
NQVRAVAMSS TDGLVRGMEI IDTGAPISVP VGKSTLGRIF NVLGEPVDEK GSVNVNETFP
IHRPAPKLTD LETKPKVFET GIKVIDLLTP YRQGGKIGLF GGAGVGKTVI MMELINNIAI
QHGGVSVFGG VGERTREGND LYNEMIESKV INPDNPEDSK IALVYGQMNE PPGARMRVGL
SALTMAEYFR DVNKQDVLLF IDNIFRFVQA GSEVSALLGR MPSAVGYQPT LGTDVGDLQE
RITSTKEGSI TSIQAVYVPA DDLTDPAPAT TFAHLDGTTV LSRGLASKGI YPAVDPLDST
STMLQPNIVG QEHYKTARAV QSTLQRYKEL QDIIAILGLD ELSEEDRQTV DRARKIERFL
SQPFFVAEVF TGSPGKYVTL EDTIKGFNMI LNGELDDLPE QAFYMVGNID EAIAKAEKLK
KG