Gene PCC7424_5089 details

Gene Information

• Locus tag: PCC7424_5089
• Symbol: atpC
• ID: 7107988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: -
• Start bp: 5653419
• End bp: 5653835
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643483299
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002380308
• Protein GI: 218441979
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 69
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACACTAT CCGTCCGTAT AATCACCCCA GACAAAATCG TTTGGGACGA TGAAGCTGAG 
GAAATTATTT TACCTAGCAC AACTGGACAA TTAGGGATTT TGAGTGGTCA TGCTCCCCTA 
TTGACAGCTT TAAATATAGG TGTAGTGAGA GTCCGCCCCG GTAAAGATTG GCAAACCATT 
GCAGTAATGG GAGGATTCGC TGAAGTCGAA AATAATGAAG TGAAAATTCT CGTCAATGGG 
GCTGAAGCCG GCGCAAAAAT TGACAAAGAC ACAGCCCAAC AAGAATGGAA TGAGGCTCAA 
AAACGTTTAG ACGAAGCCAG TAAAAGTGGC GATCGCCAAA AACAAATCCA AGCGGAACAA 
GCCTGGAAAC GAGCCAGAGC TAGATTTCAA GCCTCTGGTG GGTTTGTTCA AGTTTAA 

 

Protein sequence

MTLSVRIITP DKIVWDDEAE EIILPSTTGQ LGILSGHAPL LTALNIGVVR VRPGKDWQTI 
AVMGGFAEVE NNEVKILVNG AEAGAKIDKD TAQQEWNEAQ KRLDEASKSG DRQKQIQAEQ 
AWKRARARFQ ASGGFVQV