Gene PCC7424_5040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5040 
Symbol 
ID7107186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5601889 
End bp5602656 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content38% 
IMG OID643483250 
Productprotein of unknown function DUF502 
Protein accessionYP_002380260 
Protein GI218441931 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.226828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATG CGCGCTTTTT TTTCCAACGG TTGAAACAAG ATTTAAAAAA TGATCTCATC 
GCCGGTTTAT TAGTTGTCAT TCCTTTAGCG ACTACAATTT GGTTAAGTAT AACCATTGCG
AGATGGGTGA TTGATTTATT AACTCGGATT CCCAAGCAAC TCAATCCTTT TGATGATCTT
GACCCGATTT TGACCAATTT CTTAAACTTT GCCGTCGGGT TAACCGTTCC TCTCCTGTCT
ATTTTGTTAA TTGGGTTAAT GGCTCGTAAT ATTGCCGGAC GATGGTTACT CGATGTGGGA
GAACAAATTT TACAATCAAT TCCTCTAGCT GGCTCAGTTT ACAAAACTCT TCAACAAATT
TTAGAAACAC TTTTTAAAGA TTCTAAAACT AAATTTCGGC GAGTAGTCAT GATAGAATAT
CCAAGGAGAG GAATTTGGAG CATTGGTTTT GTAACCGGGA CGTTAAGCAG TCAACTTCAA
ACTCATTTAT CTAAACCGAT GCTAAATATC TTTATTCCCA CCACTCCTAA TCCGACTTCG
GGATGGTATG CGATCGTGCC AGAAGAAGAC GTGATTGATG TATCGATTTC TATAGAAGAT
GCTTTTAAAG TGTTAATTTC TGGTGGGATC GTTAATCCTA ACCAGCCGTC GTCAGTGCCG
ATTTCCTTAC CCAAATTTTA TCAAAAAAAC TCTTTAGAAA AGACTGTATC AGAAGAAGAA
TATCAATCGT TTTCAGTGGA AGAACCCGCT TTAAAACCCG AAGATTAA
 
Protein sequence
MANARFFFQR LKQDLKNDLI AGLLVVIPLA TTIWLSITIA RWVIDLLTRI PKQLNPFDDL 
DPILTNFLNF AVGLTVPLLS ILLIGLMARN IAGRWLLDVG EQILQSIPLA GSVYKTLQQI
LETLFKDSKT KFRRVVMIEY PRRGIWSIGF VTGTLSSQLQ THLSKPMLNI FIPTTPNPTS
GWYAIVPEED VIDVSISIED AFKVLISGGI VNPNQPSSVP ISLPKFYQKN SLEKTVSEEE
YQSFSVEEPA LKPED