| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4957 |
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| Symbol | |
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| ID | 7107023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5506265 |
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| End bp | 5507677 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643483169 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002380179 |
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| Protein GI | 218441850 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR00947] probable bicarbonate transporter, IctB family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTCAG CCTGGAAACG AATAACTCTT ATGGAATTAT CCCCTAGTCA GTGGCGTGGG
GCCAGTTTCG TCTATCATTT TGTCGGTTTT TTAAGCCGTT GGCGTTCTGA AAGTTGGCTG
CTTCAGTGGG CAGAACCTTT AGGCGCTCTA CTCATTTGCT TGGTTTTGGC TTTAAGTCCT
TTTGTTTCTA CCGGGTTAAT CGGGATTTTG CTGCTAGCTT GTGGCGGATA TTGGCTTTTA
TTGACTTTAT CCGATGATGA TTGGCCGTCT ATCACTCCGA TTCACCTTCT TGTTCTCCTT
TATTGGGGAA TTGCTACCAT TGCGGTCGCT TTTTCGCCGG TAAGAGCCGC CGCTTTTGAG
GGTTGGGTTA AACTGACTTT ATATTTAGTC ATGTTTGCTC TGACGGCTCG TGTCTTGCGA
TCGCCCCGTC TGACTTCGAT GATCATTACT GTATATTTAT TAACCGCTTT GGTGGTGAGT
ATTTATGGGG TGCGACAGGA AATGTTCGGG GTTGAACAGT TAGCGACTTG GAACGATCCC
ACCTCAGATT TAGCAGGGGA TACGCGAGTT TATAGCTATT TGGGTAATCC TAATCTCTTA
GCGTCCTACT TGTTACCGGC CATTGCTTTG AGTGCGGCGG CGGTATTTGT TTGGCAGGGG
TGGCTACAGA AAGCATTAGC ACTAACTTTG TTTTTTGTCA ATACGGCCTG TTTGTACTAT
ACCGATAGTC GAGGCGGTTG GATTGGCATG ATGGGTCTTT CTCTCGTTTT TCTGCTGTTG
CTCTATTATT GGTTTAAAGA TAGCCTTTCT CCCTTTTGGC AAAAGTGGTT ACTTCCCCTG
GTTTTGGGAA CTCTCGCCGC CTTTGTAATC CTGGCTATGA TTATGGTAGA ACCCCTGCGG
ATTCGGGTAA TGAGTATTTT TGCCGGACGA GAAGACAGTA GTAATAATTT TCGGATGAAT
GTTTGGGCTT CCGTGATTAA AATGATTAAA GCTTATCCAA TTATTGGGAT TGGCCCGGGC
AATGAAGCGT TTAATAAAGT TTATCCTCTG TTTATGCACC CTAAATATAG CGCTTTGAGT
GCTTATTCGG TGTTGCTCGA AATTATGGTA GAAACCGGTG TAATTGGGTT AAGTTGTTTT
GTGTGGTTAT TAGTCGTCAC CTTTAACCAG GGAGTGCGTC AAATAGGACT GTTACGACAG
CAAAGAAATC TTCAGGGGTT TTGGTTAATT GCTGCGATCG CCACTATGGC CGGAATGTTA
GCTCATGGTT TTGTCGATAC GGTGTGGTAT CGTCCCCAAA TTGCTTCCCT ATGGTGGCTG
ATGGTGGCTC TCATTGCCAG TCATTATTCC GGAGTAATAC CTAAAAATTC GCCAAAAAAA
GTTAAAGACG GGCTTTCATC GCACCGCCTC TAA
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| Protein sequence | MTSAWKRITL MELSPSQWRG ASFVYHFVGF LSRWRSESWL LQWAEPLGAL LICLVLALSP
FVSTGLIGIL LLACGGYWLL LTLSDDDWPS ITPIHLLVLL YWGIATIAVA FSPVRAAAFE
GWVKLTLYLV MFALTARVLR SPRLTSMIIT VYLLTALVVS IYGVRQEMFG VEQLATWNDP
TSDLAGDTRV YSYLGNPNLL ASYLLPAIAL SAAAVFVWQG WLQKALALTL FFVNTACLYY
TDSRGGWIGM MGLSLVFLLL LYYWFKDSLS PFWQKWLLPL VLGTLAAFVI LAMIMVEPLR
IRVMSIFAGR EDSSNNFRMN VWASVIKMIK AYPIIGIGPG NEAFNKVYPL FMHPKYSALS
AYSVLLEIMV ETGVIGLSCF VWLLVVTFNQ GVRQIGLLRQ QRNLQGFWLI AAIATMAGML
AHGFVDTVWY RPQIASLWWL MVALIASHYS GVIPKNSPKK VKDGLSSHRL
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