Gene PCC7424_4949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4949 
Symbol 
ID7107015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5498140 
End bp5498736 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content37% 
IMG OID643483161 
ProductExopolysaccharide synthesis ExoD 
Protein accessionYP_002380171 
Protein GI218441842 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.811076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTGA AGTTTTCTCA AGATTTAGAT AGTCTCTTAA AACGATTAGC TGATCACCCT 
CTAACTCTTA AGGAAATTTT AGACGAAACT TCGGAACGGG GGTTCAGTTT AATGATTGGG
GTGTTAGCTT TACCGTTTCT GTTTCCCATG CCGCCTGGAC TCCCCCTTAT TTTTACCTCT
GCTAGTATTT TATTATCTTT ACAAATGGCA TGGGGAAAGC GAAAACCTTG GCTACCTAAA
AAAATAGCTA GAATTCAATT TCCTAAATCC TTAAGTCGTC AACTTTTGAG TAAACTAAAA
GGATTTCTGC GGATAGTGGA AAAAATTACT CGTCCTCGTT GGTTAGGTAT TGCTAATCAT
TCTTATACTT GGCAATTAAA CGGATGTTTA ATGACTTGGT TAGGTCTTTT ATTGATGTTA
CCTATTCCTT TTACTAATCC TTTACCCACC ATCGGGATTT TAGCCTTATC TATTGCTACC
CTAGAATCTG ATGGGTTATT GATGTGTTTG GGTTATCTCT GGAGTATCGG GATAACTGTA
TTATTTGTCT TTATTGCTTA TGCTTTGTGG CAAGCTCCCA CTTTATTATT TAACTAA
 
Protein sequence
MHLKFSQDLD SLLKRLADHP LTLKEILDET SERGFSLMIG VLALPFLFPM PPGLPLIFTS 
ASILLSLQMA WGKRKPWLPK KIARIQFPKS LSRQLLSKLK GFLRIVEKIT RPRWLGIANH
SYTWQLNGCL MTWLGLLLML PIPFTNPLPT IGILALSIAT LESDGLLMCL GYLWSIGITV
LFVFIAYALW QAPTLLFN