Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4926 |
Symbol | |
ID | 7106992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5466748 |
End bp | 5467956 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643483139 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_002380149 |
Protein GI | 218441820 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0636737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACAA AAGCTTTTAA ACGTTCATTA CAACAGTCTG AAAACTACCA CCGCAAAGGA TTTGGCCAAG AAGATGAAGC GATGGGGGTA ATGAATAGTG AATATCAGAG TTCTTTAATC CAAGAAATTC GTAATAATAA CTATAGACTA ACTCAGGGAG ATGTCACCAT TCGTCTAGCA GAGGCGTTTG GGTTTTGTTG GGGAGTTGAA AGGGCGGTGG CGATGTCTTA TGAAACCCGT CAACATTTTC CTAATCAACG GATATGGTTA ACCAATGAGG TGATACATAA TCCTTCTGTT AACCAGCGCC TACGAGATAT GAAAGTAGAA TTTATTCCCG TCATTGAAGA TCAAAAAGAT TTTAGCGTAG TTGAACGGGA TGATGTGGTT ATTTTACCGG CATTTGGGGC CAGTGTTACC GAAATGCAAT TGCTCAATGA TAAAGGGTGT ACGATTGTAG ATACAACTTG TCCTTGGGTA GCTAAAGTTT GGAATTCCGT AGAAAAACAC AAAAAACGTA ACTATACTTC TATTATTCAC GGTAAATATA AACATGAAGA AACTGTTGCT ACCAGTTCTT TTGCCGGAAC TTATTTAGTG GTTTTGAATA TGGAACAGGC GAAATATGTT TGTAATTATA TTCTCAATGG TGGAGATAAA CAGGAGTTTT TAGCTAAGTT TAAAAAAGCC TATTCTGAGG GATTTGATCC GGATACAGAT TTAGAGAGAG TGGGAATTGC CAATCAAACC ACCATGTTAA AGAGTGAAAC CGAGGAAATT GGTAAACTCT TTGAACATAC CATGTTGAAA AAGTATGGTC CCTTAGACTT AAATAATCAT TTTATGAGTT TTAATACCAT CTGTGACGCG ACTCAAGAAC GTCAAGATGC CATGCTTGAT TTAGTGAAAG AAAAGTTAGA TTTAATGGTC GTGATTGGAG GATTTAATTC TTCTAATACT ACTCACTTAC AAGAAATTTC CATTCATCAT GGTATTGTCT CTTATCATAT TGATAGTGCG GCCAGAATTG ACCTGAATAA CCACATTGAA CATAAACCCT TGGGGAAAGA TTTAGAGGTC AAAGAAAATT GGCTTCCTGA TGGTAAAATT GTCGTCGGCG TGACTTCTGG CGCTTCTACT CCTGATATTG TCGTGGAACA GGTATTACAG AAAATTTTTG CGATTAAATC TGCTGTAGCG ATGGTTTAA
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Protein sequence | MDTKAFKRSL QQSENYHRKG FGQEDEAMGV MNSEYQSSLI QEIRNNNYRL TQGDVTIRLA EAFGFCWGVE RAVAMSYETR QHFPNQRIWL TNEVIHNPSV NQRLRDMKVE FIPVIEDQKD FSVVERDDVV ILPAFGASVT EMQLLNDKGC TIVDTTCPWV AKVWNSVEKH KKRNYTSIIH GKYKHEETVA TSSFAGTYLV VLNMEQAKYV CNYILNGGDK QEFLAKFKKA YSEGFDPDTD LERVGIANQT TMLKSETEEI GKLFEHTMLK KYGPLDLNNH FMSFNTICDA TQERQDAMLD LVKEKLDLMV VIGGFNSSNT THLQEISIHH GIVSYHIDSA ARIDLNNHIE HKPLGKDLEV KENWLPDGKI VVGVTSGAST PDIVVEQVLQ KIFAIKSAVA MV
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