Gene PCC7424_4440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4440 
Symbol 
ID7111163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp4921905 
End bp4922567 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content40% 
IMG OID643482658 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002379672 
Protein GI218441343 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCATT CACCCCAAAA ACCCTCATTA AAAAAACTTC GCCCACCCCA AAGAGATGCA 
CAGGCGACTC AAGAGAAGAT ATTAGAAGCA GCAGAAAGAG AATTTTCTAG ACATGGATTA 
AAAGGAGCTA GGATCGGGGA AATTGCCCAA AATTCAGGAG TAACCACTGC TATGATTTAT 
TATTACTTTC AGAGCAAGGA AGGGTTATAC AAAGCGGTAT TAGAACGTCC TGCCTTAGAA 
GTCCAAGAAA TCATGTCCGG ACTCAATTTA GACCAAAAAC CCCCCATAGA GGCTTTAAAA 
GCGTTTATAG AGGCGGCGAT CGCCTATGAA GCGAAACATC CTCATCGGGG AATGTTGTGG 
TTTCAGGAAG CCAATCAAAA TGGAGGAGAA TACTTTAAAT TAAATAAGGG GAGTTGGTCA 
GGAATATTTG CATATATCAA CGCTATTTTA GAGAGAGGAA TGGCCGACGG AAGTTTTCGA 
CAACTCGATC CCTTAGTCAC GATCGTTCAA ATTTTGGGGA TTTGTATTTT TTACTTTAAT 
ATTCATGAAA ATTGGAAACA TTTTATGCCA GATTATGATC GATTGAGTCC AGAAGCGGTT 
AACAAGCATA CTCAAGAAGC GATCGACCTC ATTTTAAATG GAGTAAAAGC TTCAAAAATC 
TAA
 
Protein sequence
MTHSPQKPSL KKLRPPQRDA QATQEKILEA AEREFSRHGL KGARIGEIAQ NSGVTTAMIY 
YYFQSKEGLY KAVLERPALE VQEIMSGLNL DQKPPIEALK AFIEAAIAYE AKHPHRGMLW 
FQEANQNGGE YFKLNKGSWS GIFAYINAIL ERGMADGSFR QLDPLVTIVQ ILGICIFYFN 
IHENWKHFMP DYDRLSPEAV NKHTQEAIDL ILNGVKASKI