Gene PCC7424_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4182 
Symbol 
ID7111520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4631364 
End bp4633394 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content44% 
IMG OID643482405 
Producttype II secretion system protein E 
Protein accessionYP_002379420 
Protein GI218441091 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.231582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATT CTACATCCGC CAAGAAAAGC CGAGCTATCG TTAAAAGTGG CCTCTCCCAA 
CTTACTCCCA TTGGTAATAA GTTGGTTCAA GCCGGTTATG TTGCCCCAGA GCAAATGCAA
CAAGCGTTAG TCGAAACCCG TAAATCAGGC CGCACGTTAG TCGATGTTTT ACAAAACATT
ACGGGGCGAC AGATGCCCCC TGACTTGCAG CGACAATACA AAAAACATCA TTTATTTGAA
CTCAAAGTTC TCTACGGTGT AGATTGTGTC GATCCGGAAA TTAATCAAGT CCATGAAACC
GACATGGCCC GATTGGTTGA TACCCTAATT CCGATCGATA TTTGTCGGCG TTATAAGCTG
ATTCCTCTAC AAAAGATAGA GACTGAACCG GTGGGCATTT TAGTCGCTAT GGTCGATCCT
GACAATTTGG AGGCTATGGA TGATATTAAC CGCATTTTAC GCCCACGAAA TCTGGCTTTA
CATCGACAGG TCATTACTCT ACAAGATTAT GAGCATTTAC TCGAAAAATT CCATGATGCT
CAGGTCATTA TCGAAGAAGA AAAGCAAAAG ATAGCCAAAG AAAAAGAACT CGAAAAATTA
GGGAATTTAA CCGATATTGT CGATAGTCTG GATCTGGGAT CTGATCGAGA TAGTGACGAG
GATACCGCAG ATGATCTCGG CGAAGATGAT GCCGGTAAAG CTCCGGTCAT TAATCTAGTC
AATAAAATTT TGGCTAAAGC ACTCCAAGAA GGAACTTCTG ATATTCACGT TGAACCGCAA
GAAGAGTCTT TACGGGTGCG TTTTCGTAAG GATGGGGTAC TCCATCAAGC GTTTGATCCC
CTCCCTCGAC AAATTACTCC GGCAGTAGTC GCCCGTTTCA AGATTATGGC AGATTTGGAC
ATTGCGGAAA GACGACTGCC TCAAGATGGT AAAATCCGCC GAATGTACCA AGGCCGAAAA
GTCGATTTTC GGGTCAATAC GTTACCGAGT CGCTATGGGG AAAAAGTCTG TTTACGGATC
TTGGATAACT CAGCGACTCA ATTAGGATTA GATAAGCTCA TTACTGACCA AAAAACCTTA
CAAATTGTTC GGGATCTTGC TAGTCGTCCT TTTGGGTTGA TTTTAGTCAC TGGGCCGACG
GGGTCAGGAA AATCCACCAG TTTATACTCG GTTTTGGCGG AACGGAATCA CCCAGGAGTC
AATATTAGTA CGGCAGAAGA CCCGATCGAA TATTCTTTAC CCGGAATTAC TCAAGTTCAA
GTCATTCGGG AAAAAGGAAT GGATTTTTCG TCTATTCTGC GGGCGTTTAT GCGTCAAGAC
CCTGATGTCA TCCTCGTGGG TGAAACCCGA GATAAGGAAA CCGCTAAAAC CGCGATTGAA
GCCGCCTTAA CCGGTCACTT GGTTTTAACC ACCCTCCATA CTAATGATGC CGCCGGCGCG
ATCGCTCGTT TGGATGAAAT GGGGGTTGAA CCGTTTATGA TTTCGGGTGC ATTATTGGGA
GTTTTGGCAC AACGGTTAAT GCGGCGAGTC TGTACGGAAT GTCGAGTTCC TTATAATCCT
GACAAAGCGG AATTAGCTCG GTTTGGCTTA TCGGCTTCTA ATAATGATGA AGTGACTTTT
TACAAAGCAA AGGCTTTAAC CTTGGATGAA CTTGCTCAAG CTAAACAACA AGGTACAGTC
TGTTCTAAAT GTGGCGGAAA AGGCTATAAA GGTCGGGTTG GGGTTTATGA AGTGATGCAA
AATAGCGAAC GCCTGCAAAA ATTAATCAAT GAAGGAGCAA CAACCGATCG CATTAAGGAT
GCTGCTGTAG AAGAAGGGAT GACGACCTTA TTAGCTTACA GTTTAAATCT AGTGCAAGAA
GGTTACACCA CCTTAGAAGA AGTGGAACGG GTGACATTTA CAGATTCAGG TTTAGAGGCT
GAACTAAAAG CTAAACGGAA GAGTGGGTTA ATTTGTCGCT CTTGTCAAGC GGATTTAGTT
CCAGAATGGC TTGATTGTCC TTATTGTATG ACTCCTCGTT TTAGTGAGTA A
 
Protein sequence
MTYSTSAKKS RAIVKSGLSQ LTPIGNKLVQ AGYVAPEQMQ QALVETRKSG RTLVDVLQNI 
TGRQMPPDLQ RQYKKHHLFE LKVLYGVDCV DPEINQVHET DMARLVDTLI PIDICRRYKL
IPLQKIETEP VGILVAMVDP DNLEAMDDIN RILRPRNLAL HRQVITLQDY EHLLEKFHDA
QVIIEEEKQK IAKEKELEKL GNLTDIVDSL DLGSDRDSDE DTADDLGEDD AGKAPVINLV
NKILAKALQE GTSDIHVEPQ EESLRVRFRK DGVLHQAFDP LPRQITPAVV ARFKIMADLD
IAERRLPQDG KIRRMYQGRK VDFRVNTLPS RYGEKVCLRI LDNSATQLGL DKLITDQKTL
QIVRDLASRP FGLILVTGPT GSGKSTSLYS VLAERNHPGV NISTAEDPIE YSLPGITQVQ
VIREKGMDFS SILRAFMRQD PDVILVGETR DKETAKTAIE AALTGHLVLT TLHTNDAAGA
IARLDEMGVE PFMISGALLG VLAQRLMRRV CTECRVPYNP DKAELARFGL SASNNDEVTF
YKAKALTLDE LAQAKQQGTV CSKCGGKGYK GRVGVYEVMQ NSERLQKLIN EGATTDRIKD
AAVEEGMTTL LAYSLNLVQE GYTTLEEVER VTFTDSGLEA ELKAKRKSGL ICRSCQADLV
PEWLDCPYCM TPRFSE