Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4182 |
Symbol | |
ID | 7111520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4631364 |
End bp | 4633394 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643482405 |
Product | type II secretion system protein E |
Protein accession | YP_002379420 |
Protein GI | 218441091 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.231582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTATT CTACATCCGC CAAGAAAAGC CGAGCTATCG TTAAAAGTGG CCTCTCCCAA CTTACTCCCA TTGGTAATAA GTTGGTTCAA GCCGGTTATG TTGCCCCAGA GCAAATGCAA CAAGCGTTAG TCGAAACCCG TAAATCAGGC CGCACGTTAG TCGATGTTTT ACAAAACATT ACGGGGCGAC AGATGCCCCC TGACTTGCAG CGACAATACA AAAAACATCA TTTATTTGAA CTCAAAGTTC TCTACGGTGT AGATTGTGTC GATCCGGAAA TTAATCAAGT CCATGAAACC GACATGGCCC GATTGGTTGA TACCCTAATT CCGATCGATA TTTGTCGGCG TTATAAGCTG ATTCCTCTAC AAAAGATAGA GACTGAACCG GTGGGCATTT TAGTCGCTAT GGTCGATCCT GACAATTTGG AGGCTATGGA TGATATTAAC CGCATTTTAC GCCCACGAAA TCTGGCTTTA CATCGACAGG TCATTACTCT ACAAGATTAT GAGCATTTAC TCGAAAAATT CCATGATGCT CAGGTCATTA TCGAAGAAGA AAAGCAAAAG ATAGCCAAAG AAAAAGAACT CGAAAAATTA GGGAATTTAA CCGATATTGT CGATAGTCTG GATCTGGGAT CTGATCGAGA TAGTGACGAG GATACCGCAG ATGATCTCGG CGAAGATGAT GCCGGTAAAG CTCCGGTCAT TAATCTAGTC AATAAAATTT TGGCTAAAGC ACTCCAAGAA GGAACTTCTG ATATTCACGT TGAACCGCAA GAAGAGTCTT TACGGGTGCG TTTTCGTAAG GATGGGGTAC TCCATCAAGC GTTTGATCCC CTCCCTCGAC AAATTACTCC GGCAGTAGTC GCCCGTTTCA AGATTATGGC AGATTTGGAC ATTGCGGAAA GACGACTGCC TCAAGATGGT AAAATCCGCC GAATGTACCA AGGCCGAAAA GTCGATTTTC GGGTCAATAC GTTACCGAGT CGCTATGGGG AAAAAGTCTG TTTACGGATC TTGGATAACT CAGCGACTCA ATTAGGATTA GATAAGCTCA TTACTGACCA AAAAACCTTA CAAATTGTTC GGGATCTTGC TAGTCGTCCT TTTGGGTTGA TTTTAGTCAC TGGGCCGACG GGGTCAGGAA AATCCACCAG TTTATACTCG GTTTTGGCGG AACGGAATCA CCCAGGAGTC AATATTAGTA CGGCAGAAGA CCCGATCGAA TATTCTTTAC CCGGAATTAC TCAAGTTCAA GTCATTCGGG AAAAAGGAAT GGATTTTTCG TCTATTCTGC GGGCGTTTAT GCGTCAAGAC CCTGATGTCA TCCTCGTGGG TGAAACCCGA GATAAGGAAA CCGCTAAAAC CGCGATTGAA GCCGCCTTAA CCGGTCACTT GGTTTTAACC ACCCTCCATA CTAATGATGC CGCCGGCGCG ATCGCTCGTT TGGATGAAAT GGGGGTTGAA CCGTTTATGA TTTCGGGTGC ATTATTGGGA GTTTTGGCAC AACGGTTAAT GCGGCGAGTC TGTACGGAAT GTCGAGTTCC TTATAATCCT GACAAAGCGG AATTAGCTCG GTTTGGCTTA TCGGCTTCTA ATAATGATGA AGTGACTTTT TACAAAGCAA AGGCTTTAAC CTTGGATGAA CTTGCTCAAG CTAAACAACA AGGTACAGTC TGTTCTAAAT GTGGCGGAAA AGGCTATAAA GGTCGGGTTG GGGTTTATGA AGTGATGCAA AATAGCGAAC GCCTGCAAAA ATTAATCAAT GAAGGAGCAA CAACCGATCG CATTAAGGAT GCTGCTGTAG AAGAAGGGAT GACGACCTTA TTAGCTTACA GTTTAAATCT AGTGCAAGAA GGTTACACCA CCTTAGAAGA AGTGGAACGG GTGACATTTA CAGATTCAGG TTTAGAGGCT GAACTAAAAG CTAAACGGAA GAGTGGGTTA ATTTGTCGCT CTTGTCAAGC GGATTTAGTT CCAGAATGGC TTGATTGTCC TTATTGTATG ACTCCTCGTT TTAGTGAGTA A
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Protein sequence | MTYSTSAKKS RAIVKSGLSQ LTPIGNKLVQ AGYVAPEQMQ QALVETRKSG RTLVDVLQNI TGRQMPPDLQ RQYKKHHLFE LKVLYGVDCV DPEINQVHET DMARLVDTLI PIDICRRYKL IPLQKIETEP VGILVAMVDP DNLEAMDDIN RILRPRNLAL HRQVITLQDY EHLLEKFHDA QVIIEEEKQK IAKEKELEKL GNLTDIVDSL DLGSDRDSDE DTADDLGEDD AGKAPVINLV NKILAKALQE GTSDIHVEPQ EESLRVRFRK DGVLHQAFDP LPRQITPAVV ARFKIMADLD IAERRLPQDG KIRRMYQGRK VDFRVNTLPS RYGEKVCLRI LDNSATQLGL DKLITDQKTL QIVRDLASRP FGLILVTGPT GSGKSTSLYS VLAERNHPGV NISTAEDPIE YSLPGITQVQ VIREKGMDFS SILRAFMRQD PDVILVGETR DKETAKTAIE AALTGHLVLT TLHTNDAAGA IARLDEMGVE PFMISGALLG VLAQRLMRRV CTECRVPYNP DKAELARFGL SASNNDEVTF YKAKALTLDE LAQAKQQGTV CSKCGGKGYK GRVGVYEVMQ NSERLQKLIN EGATTDRIKD AAVEEGMTTL LAYSLNLVQE GYTTLEEVER VTFTDSGLEA ELKAKRKSGL ICRSCQADLV PEWLDCPYCM TPRFSE
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