| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4136 |
|---|
| Symbol | |
|---|
| ID | 7111474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 4579542 |
|---|
| End bp | 4583201 |
|---|
| Gene Length | 3660 bp |
|---|
| Protein Length | 1219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643482360 |
|---|
| Product | Tetratricopeptide domain protein |
|---|
| Protein accession | YP_002379375 |
|---|
| Protein GI | 218441046 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAG CTAGATTACA AGCTTATTTC AATTTAATTG AACAGTTGCT CAACTGCCCC
CAAGGTGATG AATCTAATAT CCTGCAAGCT AATGAGGAGT TGTTGGATAG GGAGTTATTG
CAGGTGATGG CAAACTATGC AGCATGGTTG GAGGAACAGG GTAATAAGAA TGCTGCGGAC
TGGTTGCGGA ATTGGGCGCT TTCTTTGGAG GAATATCTCA ACCGTCAAGA GGTCAATATT
GAGGAATATC AGGACTTTTT ATTAGAAGTA TTACAAGCAG AATATAAAAA TAGTGATCCT
GCGGTAGTTT ATCCGATTTT AGAACGTCAC CAACACCTAT TAAATAATAC CTTTGCCCAA
CTGTTGCAAC AATGGGCGAG AAATGTGTTT TCTAAAAATA ATACAGAAGA GGCGGCGGCT
ATTGCAGGGG TGATTCAAAA TTTATGTATT GATATTCAAC AGTTTCCTAG AGGAAGTCGG
GCTAATAATC TAGAAATTGC CATTACAGGA TATGACACTT TGTTAAAACT ATATACCCGT
GAAGCCTTTC CTGAAGATTG GGCAGGGACA CAAAATAATC TGGGGGCGGC TTATAGAGAG
CGCATCCGAG GGGAAAGGGC AGAGAATCTA GAATTGGCTC TAGCGGCATA TCACCAGTCA
TTAGAAGTTT ATACCCGTGA AGCCTTTCCT GTTGAATGGG CAGGGACACA AAATAATCTG
GGGATAGCTT ATAGAAATCG CATCCGAGGG GAAAGGGCAG AGAATCTAGA ATTGGCTCTA
GCGGCATATC ACCAGTCATT AGAAGTTTCT ACCCGTGAAG CCTTTCCTGT TGAATGGGCA
GGGACACAAA ATAATCTGGG GATAGCTTAT GGAGAGCGCA TCCGAGGGGA AAGGGCAGAG
AATCTAGAAT TGGCTCTAGC GGCATATCAC CAGTCATTAA AAGTTTATAC CCCCCAAGCC
TTTCCTGTTG AATGGGCAGG GACACAAAAT AATCTGGGGA TAGCTTATGG AGAGCGCATC
CGAGGGGAAA GGGCAGAGAA TCTAGAATTA GCCATAGCAG CGTATAACCA GTCATTAGAA
GTTTATACCC CCCAAGCCTT TCCTGTTGAA TGGGCAAGGG CACAAAATAA TCTGGGGAAT
GCTTATAGCT CTCGCATCCG AGGGGAAAGG GCAGAGAATC TAGAATTAGC TATAGCAGCA
TATAACCAGT CATTAGAAGT TTATACCCCC CAAGCCTTTC CTGTTGAATG GGCAACGACA
CAAAATAATC TGGGGAATGC TTATAGCTCT CGCATCCGAG GGGAAAGGGC AGAGAATCTA
GAATTAGCTA TAGCAGCATA TAACCAGTCA TTAGAAGTTT ATACCCGCGA AGCCTTTCCT
GTTGATTGGG CAAGGACACA AAATAATCTG GGGATAGCTT ATGGTGATCG CATCCGAGGG
GAACGGGCAG AGAATCTAGA ATTGGCTATA GCAGCATTTA ACCAGTCATT AGAAGTAAGA
ACCCGTGATG CCTTTCCTGT TGAATGGGCA ATGCCACAAA ATAATCTGGG GATAGCTTAT
AGAAATCGTA TCCGAGGGGA AAGGGCAGAG AATCTAGAAT TGGCTATAGC AGCATATAAC
CAGTCATTAG AAGTTTATAC CCGTGAAGCC TTTCCTGTTG ATTGGGCTTT GATACAAAAT
AATCTGGGGA GTGCTTATAG TGATCGCATC CGAGGGGAAA GGGCAGAGAA TCTAGAATTA
GCTATAGCAG CATATAACCA GTCATTAGAA GTTTATACCC GTGAAGCCTT TCCTGAAGAT
TGGGCAAGGA CACAAAATAA TCTGGGGATA GCTTATAGAG ATCGCATCCG AGGGGAAAGG
GCAGAGAATC TAGAATTGGC TATAGCAGCA TATAACCAGT CATTAGAAGT AAAAACCCCG
ATCGCTTTTC CGATAGACTG TTTACAAACA GGACGTAATT TAGGGGATGT TGCTACCCTC
TCTGAAGACT GGGAAACGGC AAGAATTGGC TATAGTCGGG CTATTGCTGC GGTAGAACAA
AGTCGACAAT GGGCTAAAAC TCACCACAGT AAGGGAGAAA TACAAGCAGA TGCCATCGAT
GTTTATCACA AAATGATCGA AGTTTGTTTA AAAGATAACC TGTTAGATTT AGCCTTTACC
ACTGTTGAAA GTAATAAATC TCGGTATTTA GTAGAATTAT TGGACTTTAT TAACGTTACG
ATTCCTGAGA ATATAACCGA CGACCAAAGA CAATTGTATG ATGATTATAT CGGGTTACGT
CGTCAGTTAG ATATATCAGG GTTAGAGTTT AGGGAAACAA AAGAAGGCAA AGAACAGTTA
AGCCGCGATC ATCTTCGGTT AGATGAACTG CTAAATAATA TCCAAACTTT TGATCCCGAT
TTTACCCTAA CCCAACGGGT TGAACCGATT ACATTAAAAA CTATTCAATC TATCCTAGAT
GAGAATACCG TGATTTGGGA ATGGTATATA AGCAGCGATC GCTTTTATAC TTTTATCATC
ACTCATAATA GTATTGATGT AGTGGTGAGT AACAGTGATG AGTTAGAAAC CTTAATAGAC
TGGGCTAAAG ATTACTTAAC AGACTATCGT CAAAAAGGAT GGGAAAATAA CTTACCCGAA
AAACTAGCTA AATTAGGGGA TACCTTGTTA CTGCCTCAAG TCTTAGCAAA AACCCCTCAT
GAGTGTAAAC ATTTAATCTT AATTCCCCAT CAATACTTAC ATTTATTTCC CATTCATGCC
ATTTCAACCC TACAACAAAG ATTTACAGAC GGTATTCAAT ATATTCCCAG TTGCCAACTT
TTACACAGAT TACATCAAAA ATCCTTTAAT AGAGAATACC CTAGTCATTT AAGATATTTT
TTCGGACTGC AAAACCCAAC GGAAGATTTA GCCTATAGTG ATGTAGAAGT AGAAACCATT
CAACAAAAAT TTAACCCTAA TATTTTTATT CTCAAAGGAA AAGAAGCCAC TAAAAACAAA
TTTATTCACC CCGACACTAT AAATAGATTA AAAGAGAGTT CTTTTGTTCA TTTTGCTTGT
CATGGAGGAT ATAACTTTAA ATCTCCCTTA GAGTCAGCTT TACTTTTAGC CGGAAGCATA
GAAACAGAAC AAACCGCTAT CAATAGAGAG GAAGAAACCT CAACAATTAC CTTGAGAGAT
GGTAGCAGAG GAAACACCAA AGAAGGGTTA ACCCTGCGGG ATATCTTTGA AAAAATTAAC
TTATCTCAAT GTTATTTAGT CGCCTTATCT GCTTGCGAAA CAGGGATAAC CGGCTTTAGC
AAAGAAATAG ATGAATATAT CGGGTTAGGA AGTGGATTTT TATATGCTGG AAGTCTTCAT
GTTATCAACA GTTTATGGAG TGTAGGAGAT TTCCCAACAG CGCTGTTAAT GATTCGTTTT
TATCAACTGC TGTTAGATGA AACCAACTCC TTAACCGTTT GTCAAGCATT ACAAACCACT
CAACAGTGGA TGCAAACCGC CACCAGACAA GATATTATTA ACTGGGTACA AACCTTAAAC
TTTAGTAATG AAAAACTAAT TGAAAATATC AGCATCAGTT TAAGACGAGA TTATCCTAAC
CCACCCTTTA ACCATCCCAT ATATTGGGCT GCCTTTTGTA GTTTAGGTAA TGTAAGCTAG
|
|---|
| Protein sequence | MDEARLQAYF NLIEQLLNCP QGDESNILQA NEELLDRELL QVMANYAAWL EEQGNKNAAD
WLRNWALSLE EYLNRQEVNI EEYQDFLLEV LQAEYKNSDP AVVYPILERH QHLLNNTFAQ
LLQQWARNVF SKNNTEEAAA IAGVIQNLCI DIQQFPRGSR ANNLEIAITG YDTLLKLYTR
EAFPEDWAGT QNNLGAAYRE RIRGERAENL ELALAAYHQS LEVYTREAFP VEWAGTQNNL
GIAYRNRIRG ERAENLELAL AAYHQSLEVS TREAFPVEWA GTQNNLGIAY GERIRGERAE
NLELALAAYH QSLKVYTPQA FPVEWAGTQN NLGIAYGERI RGERAENLEL AIAAYNQSLE
VYTPQAFPVE WARAQNNLGN AYSSRIRGER AENLELAIAA YNQSLEVYTP QAFPVEWATT
QNNLGNAYSS RIRGERAENL ELAIAAYNQS LEVYTREAFP VDWARTQNNL GIAYGDRIRG
ERAENLELAI AAFNQSLEVR TRDAFPVEWA MPQNNLGIAY RNRIRGERAE NLELAIAAYN
QSLEVYTREA FPVDWALIQN NLGSAYSDRI RGERAENLEL AIAAYNQSLE VYTREAFPED
WARTQNNLGI AYRDRIRGER AENLELAIAA YNQSLEVKTP IAFPIDCLQT GRNLGDVATL
SEDWETARIG YSRAIAAVEQ SRQWAKTHHS KGEIQADAID VYHKMIEVCL KDNLLDLAFT
TVESNKSRYL VELLDFINVT IPENITDDQR QLYDDYIGLR RQLDISGLEF RETKEGKEQL
SRDHLRLDEL LNNIQTFDPD FTLTQRVEPI TLKTIQSILD ENTVIWEWYI SSDRFYTFII
THNSIDVVVS NSDELETLID WAKDYLTDYR QKGWENNLPE KLAKLGDTLL LPQVLAKTPH
ECKHLILIPH QYLHLFPIHA ISTLQQRFTD GIQYIPSCQL LHRLHQKSFN REYPSHLRYF
FGLQNPTEDL AYSDVEVETI QQKFNPNIFI LKGKEATKNK FIHPDTINRL KESSFVHFAC
HGGYNFKSPL ESALLLAGSI ETEQTAINRE EETSTITLRD GSRGNTKEGL TLRDIFEKIN
LSQCYLVALS ACETGITGFS KEIDEYIGLG SGFLYAGSLH VINSLWSVGD FPTALLMIRF
YQLLLDETNS LTVCQALQTT QQWMQTATRQ DIINWVQTLN FSNEKLIENI SISLRRDYPN
PPFNHPIYWA AFCSLGNVS
|
|---|
| |