| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4084 |
|---|
| Symbol | |
|---|
| ID | 7109003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 4524235 |
|---|
| End bp | 4526766 |
|---|
| Gene Length | 2532 bp |
|---|
| Protein Length | 843 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643482309 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_002379325 |
|---|
| Protein GI | 218440996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0457] FOG: TPR repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGACGAG AAAAGGAACT GCACTTGCTG CATGAAGATT TAGGGAGAGG AGATTTTGTT
GCGGTGACGG GAATGGGGGG AGTGGGTAAA ACTGAGTTGG TGACTCAGTA TGTTAAGCGG
TATGGGGAAG CTTACGGGGG GATAACTTGG TTTAATGATA GGGAAAGGGG TTTGGCGGCA
GAAGTTTTCA AGTTTTTTGT TTTACAGTTA AATTATGAGA TTCCCCAAGA GTTAGGGGGA
CAACGGTTAA GTCTTAAACA ACAATTAGAG TGGTGTTGGA GTAATTATCC GGCTTGTGAG
TTGCCTATTT TACTGGTTTT TGATGATGTT ACTCATTTAG ATAATTTTCG GGAGGTTGTT
CCTAGTGATA ACCGTTTTCG AGTTTTGGTG ACGACTCGAC TACAATATCT AGACCCTAAT
TTTATTAGTG AGGTGGGTTT AGATGTTCTT TCCCCAGAAA ATGAACCGGG TAAGGCGTTA
GAACTGTTAG AAAGTTTGTT AGGAACGAAA GATAAGCGCG TCCAAAGAAA ACCCCAAGCG
GCAGCAAATA TATGTCAATG TTTGGAGTTT TTGCCGTTGG GGATAATTTT AGTCGGGGGG
TATTTGGTTA ATGAGCCGGA TTTGTCTTTA GAGAGAATGT TACAGCGCTT GCAGGAGAAA
AAGTTAGCAG AGGAAGCGCT ACAGCAACGG GAAAGTCTTA ATAAATATGA AAGGGGAGTT
AGGGCGGCTT TTGCGTTAAC TTGGGAAGAA CTTAATCCTT TGTCTCAACA AGTAGGAATG
TTCCTCAGTT TATTCTCTCC TAAGTTGATT CATTGGGATT TGGTGGTAGG GGTTGTGTGT
GACCTCTCCC CTGACCCCTC TCCTACTATG AGAGGGGAGA ATATTGACCT CTCCCCCAAC
CCCTCTCCTA CTATGAGAGG GGAGAATATT GATATTGTTC CCCCTTCCCT TGTAGGGAAG
GGGGTTAGGG GGTTAGGTCT TAATTGGTCG GAGGAGAAGT TAAACGAGGG GAAAAAGCAA
CTCTATAAAC GAAATTTGCT GCAACGGGAA GAAGAGAGAG AGGGATGTTA TAAAATTCAT
GCTTTAGTAA GGTGGTTTTT ACAGGAAAGG TTAGAGGAGT CAGGGGAGAT AAAGGGAGTT
TTAAAACAAA CTTTCGCCAC CGCGATGATA ACTAAGGCTA AAATTATTCC TAAGCAACCC
AGTGTTACAG ATATTGAAAA TGTTAAAGAT TTTATTCCCC ATATAGAAGC ATTGGCAGAG
AGTTTAATTG AAGAAGCAAA GGACAAAAGA CAGGGAAAGA TCATTACCTC AGCATTCTTG
TCTGATGAGG ATATTATCCG GCCTTTTGTG GGGGTAGGAT GGTTTTATCA AGGGCAGGGG
TTATATTTTT TAGCAGAACC TTGGTTAAAG CAATATGTAG ATGTGCTTAA AAGTTACTTT
GGAGAAGAAC ATCCCGATGT AGCAACCAGT TTGAACAATT TAGCCGTACT CTACCATTAC
CAAGGGCGCT ACACTGAAGC CGAACCCCTG TACCTCCAAG CGTTGGAGAT GAGAAAGCAA
CTGTTAGGGC AATCTCATCC TGATGTGGCA ACCAGTTTGA ACAATTTAGC CATTCTCTAC
TATTCAATGG GGCGCTACGA AAAAGCCGAA CCCCTATACC TCGAAGCTTT GGAGATGTAT
AAGCAACTGT TGGGGCAATC TCATCCTGAT GTGGCAACCA GTTTGAACAA TTTAGCCATT
CTCTACTATT CAATGGGGCG CTACGAAAAA GCCGAACCCC TATACCTCGA AGCTTTGGAG
ATGTATAAGC AACTGTTGGG GCAATCTCAT CCTGATGTGG CAACCAGTTT GAACAATTTA
GCCATTCTCT ACTATTCAAT GGGGCGCTAC GAAAAAGCCG AACCCCTATA CCTCGAAGCT
TTGGAGATGT ATAAGCAACT GTTGGGGCAA TCTCATCCTG ATGTGGCAAC CAGTTTGAAC
AATTTAGCCA TTCTCTACTA TTCAATGAGG CGCTACAAAA AAGCTGAACC CCTATACCTC
GAAGCTTGGG AGATGTATAA GCAACTGTTG GGGCAATCTC ATCCTCTTGT CGCAACGAGC
TTGAACAATT TAGCCCTTCT CTACTCTTCA ATGGGGCACT ACGACAAAGC TGAACCTCTG
TTGCTCGAAG CTTTGGAGAT GAGTAAGCAA CTGTTGGGGC AATCTCATCC TGATGTGGCA
ACCAGTTTGA ACAATTTAGC CCTTCTCTAC TCTTCAATGG GGCGCTACGA AAAAGCCGAA
CCTCTCTACC TCGAAGCTTT GGAGATATGT GAACGAGTCT TAGGGAATAA TCATCCTAAT
ACGGTGGCAA TTAGAGAAAA TCTTGACCTT ATGCAACAGG AACGTACTTC CCTTGACATC
TGGAGTCATC GCTTGGGTTA CGTTGTTGGA ATTTTGTTAG GAATAGTGAT ATTACCTGTT
GTAATCTTGT TAGTACCCTT TTATGTCCTG TGGTTGCTCT TTAAGCGCTT GTTTACTTTC
CTGTTCCGTT AA
|
|---|
| Protein sequence | MGREKELHLL HEDLGRGDFV AVTGMGGVGK TELVTQYVKR YGEAYGGITW FNDRERGLAA
EVFKFFVLQL NYEIPQELGG QRLSLKQQLE WCWSNYPACE LPILLVFDDV THLDNFREVV
PSDNRFRVLV TTRLQYLDPN FISEVGLDVL SPENEPGKAL ELLESLLGTK DKRVQRKPQA
AANICQCLEF LPLGIILVGG YLVNEPDLSL ERMLQRLQEK KLAEEALQQR ESLNKYERGV
RAAFALTWEE LNPLSQQVGM FLSLFSPKLI HWDLVVGVVC DLSPDPSPTM RGENIDLSPN
PSPTMRGENI DIVPPSLVGK GVRGLGLNWS EEKLNEGKKQ LYKRNLLQRE EEREGCYKIH
ALVRWFLQER LEESGEIKGV LKQTFATAMI TKAKIIPKQP SVTDIENVKD FIPHIEALAE
SLIEEAKDKR QGKIITSAFL SDEDIIRPFV GVGWFYQGQG LYFLAEPWLK QYVDVLKSYF
GEEHPDVATS LNNLAVLYHY QGRYTEAEPL YLQALEMRKQ LLGQSHPDVA TSLNNLAILY
YSMGRYEKAE PLYLEALEMY KQLLGQSHPD VATSLNNLAI LYYSMGRYEK AEPLYLEALE
MYKQLLGQSH PDVATSLNNL AILYYSMGRY EKAEPLYLEA LEMYKQLLGQ SHPDVATSLN
NLAILYYSMR RYKKAEPLYL EAWEMYKQLL GQSHPLVATS LNNLALLYSS MGHYDKAEPL
LLEALEMSKQ LLGQSHPDVA TSLNNLALLY SSMGRYEKAE PLYLEALEIC ERVLGNNHPN
TVAIRENLDL MQQERTSLDI WSHRLGYVVG ILLGIVILPV VILLVPFYVL WLLFKRLFTF
LFR
|
|---|
| |