| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3923 |
|---|
| Symbol | |
|---|
| ID | 7107328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 4358776 |
|---|
| End bp | 4359450 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643482148 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002379167 |
|---|
| Protein GI | 218440838 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTC TTTTAGTAGA GGATGATCCT AAACAACTCA AACCATTGTT AACTGCTTTG
TCCCATGCTC AACATACAGT TGATGGCGTT CAAGACGGCG AAACTGCCCA ATGGCTATTA
AGTGAGCGAG AGTATGATTT GCTGATTTTA GACTGGATGT TACCCCATAT CAGTGGAATC
GATCTCTGTC GCCAGTATCG CAGCAAAAAG AAAGCTACAC CAATCTTACT TTTAACAGCT
AAAGATACAA CATCTGATAA AGTGGCGGGA TTGGACGCAG GAGCAGACGA TTATTTAGTT
AAGCCTATTG ATGTGATGGA ATTTTTAGCT AGAGTTAGAG CATTAGGAAG ACGTTCACTC
CAGTGGCAAG AAGAATGTTT AAGCATTGCA GATTTAATGC TTCAACCTGC CCATCTTAGC
ATTAAACGAG GAGATCATAG CACTTCCCTC TCTAGCCAAG AATTTAAATT ATTAGAATAT
TTTTTGCGAC ATCCGCGACA AATTTTAACT CGTGACCAGA TTGAACAAGC GATTTGGGAG
TGGGATATTC AACCAGAAAA TAATACAATT ACGGCATTGA TTCGTCGCCT TAGACAGCGT
TTGAGAAATG TCGGTGCTAA CCATTGGATT GAAACAATTT ATGGAATGGG TTATCGACTT
AATCCTCCTT TTTAA
|
|---|
| Protein sequence | MRILLVEDDP KQLKPLLTAL SHAQHTVDGV QDGETAQWLL SEREYDLLIL DWMLPHISGI
DLCRQYRSKK KATPILLLTA KDTTSDKVAG LDAGADDYLV KPIDVMEFLA RVRALGRRSL
QWQEECLSIA DLMLQPAHLS IKRGDHSTSL SSQEFKLLEY FLRHPRQILT RDQIEQAIWE
WDIQPENNTI TALIRRLRQR LRNVGANHWI ETIYGMGYRL NPPF
|
|---|
| |