| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3523 |
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| Symbol | |
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| ID | 7112135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 3917560 |
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| End bp | 3920799 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643481762 |
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| Product | diguanylate cyclase with PAS/PAC and GAF sensors |
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| Protein accession | YP_002378783 |
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| Protein GI | 218440454 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATT CTCAGCGACT GAGCTTATCA ATTCTCAAAA TGACGGCCAT TTGTTTGATT
GTGGCAGCAA TAGGGATTTA TAGTCTCTAT CAAAGCTCCT TTAAGCAACA CAAACAATGG
TTAGTAGAAA CAACCCAAAA TCAGGCTAGG TTAATTGAGG CGATCGCAGA AAATTCTGAC
AATCCCCAAA TTGCCCTAGA AACTGTTTTA GATCAATCTG AAAAATTTCC CGGATTAATT
CACCCGTTTG ATTTAATCCT AATTCAACGA GAAAACCAGC AAATTTTCTT TTTAAGATTC
GATGAGGAGA ATAATAAAAT TGATTTTCAG AGCGTACCTT GGCAGAGGAA ACTATCTGGA
GAATCAGAAA CTTTTATAGA AGACTATTTA GGGGTTAAAG TTTTAGCCGC CTATGAACCC
ATTGAGCCAT ATAATTGGGG TATTATCGCT CAAATCCCTC TTAATCAAAT TCGCGCTCCT
TTTTTGATGG CCGGATTATA TACTCTTTTG GCTGCCCTAA TCGTTAATAG TTTGAGTGGT
ATTTTAGGGT TAAGACTTGG CAGTTCCAGG GGTGAGCAAA TAGAAGAAAA TGAGGCTCTT
AATGAAGCGA ATGAACAATT ACGCCGAGAA ATAAATCAAC GAGAGCGTTT TGAAACCGCT
TTACGCCGGG AAATAGACTT ATTAGCCCGA ATTATGGAAA CTAGCCCTGT GGGAATTATG
ATGGTTAATT CACAAGGGGA GATTATCTTG GCCAGCGAGC AAGCGGAGCA AGTTTTAGGA
CTATCCTTAA CCCAAACTGA GCAACCCTAC AATATTTTAG AGTGGAGAAT TAGCGATGAA
GAAGGGAATT CCCTACCCCC TGAAGACTCG CCTTTTCAAG GGGTGATCCG AACTGAGCAA
TCTATATCTC GTGTTCGTTA TTGGATAGAA TTACCCAATG AACAAAACAT ATTAGTCTCG
ATTAGTGCTT CCCCTTTATT AAATACAGAA AATCAAATCC AAGGAGTTGT TTTAACCCTA
GAAGATATTA CCGAACGAGT TCAAGTGGAA TCCGCTTTAA TTCATAGTGA AGCTCAATTT
CGGGCAATTT TTGAACAGGC CGCCGTAGGA ATTGGGATTG TCAGTTTATC GGGTCAATAT
ATTCGGGTTA ATCAACGTTA TTGTGAGTTA GTTGGATATT CTCAAAAAGA ACTTTTATTA
AAAACCTATC AAGAAATTAC TCATCCTGAC GATTTATCAA AAAATCTAGA GTTAGTGAGT
CATTTATTAT TAGGAGAAAT CCAAACCGGT TCTATAGAAA AACGTTATAT TTGTAAAAAT
GGTCAAATTC AATGGGTCAA TTTAACCGCC TCTACTGTAT CTGATGCCCA GAATAATCCA
GAATATTTAA TTGGTATTGT TGAAGATATT TCTGAGCGTA AACGGGCTGA GGAAGCCTTA
CGAGATTCTG AAGAACGATT TCGTAGTATT TTTAAACAAG CTGCGGTAGG CATTGTTCAA
GTCTCTTTAT CGGGGAAATT TATCTTAGTT AATGATAAAT TTGTTGATCT TGTTCAATAT
TCGGTAGCCG AATTACAAGA AAAAACTTTT CAAGAAATTA CTCATTCCGA TGATTTACCC
CAAGAACTCA ATTATATTCA ACAAATGCTG AGGGGAGAGA TTGATGATTT TTCTTTAGAA
AAACGTTATA TCTGTAAAGA TGGGTCTCTA GTTTGGGGAC ATTTAAGCGG TTCTCTAGTT
CGCAATACTG AGGGAGAACC GATGTATTTT ATTGGGATTA TCGAAGATAT TAGAGAACGG
AAACAAGCCA TAGAAGATTT ACGGCAAAGT GAAGAACAAT ATCGTCGTAT TATTGAAACT
ACTGCCGAAG GAGTTTGGAT TATCGATCAG GAGAATAAAA CGACTTTTGT TAATCATAGA
ATGGCGCAAA TGTTAGGATA TACCATCGAC GAAATGAAAG GGAAATCTAT GTTAGATTTT
GTGGATGCTC AAGAACAAGA AATGGTGGCT AATCATATTG AACGTCGTCG TCAAGGAGTA
ATGGAATATA GAGATTTTAA ATTTATTCGC AGCGACGGAA ATTATTTATG GGCAATGATC
GCCACTAATC CAATTTATGA TTCTGTGGGG CATTATGTGG GCGCGTTAGG AATGTTAACG
GATATTACCG AACGCAAACA AACCGAGGAA ACGTTACAAC AAGTCAATGA ACAATTAACC
GCTAGAGTCT CCGAACTTGA ACAACGACAT CAAGATATTT TATTACTGAA TCAGGTGAAT
GATTTTCTCC AAGCTTGTCT GAATATTAAA GAAGCTTATC AAGTGATTGG GGAGTTACTT
CAACCGTTAT TTCCCGGATG TTCTGGCGGG TTATATATGC TCAATAGTTC TAAAACGGTA
GTCGAAGAGG TTGCTACTTG GGGAGAACAT TTATCGAGCA AAAATTTATT TACTTTTGAT
GAATGTTGGG CTTTACGACG AGGTTATATT CATTGGGTTA AACCCTCTCA ACGGAGTTTA
TTTTGTACTC ATACTCACGT TACCCCTGAC TTAGTTGAAA CTCTTTGTGT GCCGATGATG
GCTCAAGGGC AAGCGGTAGG ATTATTCTAT TTAAGTGCTT CAGAACCAGA CAAATTAAGC
GAAGTTAAAC AACAGTTAGC TAGGGCGGTT TCTGAACATA TTTCTTTGGC TTTGGTTAAT
TTACAATTGC GGGAATCTCT TAAAGCTCAA AGTATTAAAG ATTCTTTAAC TGATTTGTAT
AATCGTCGTT ATATGGAAGA ATCTCTAAAA CGAGAAATTA GTTTAGCTCA ACGCAAACAA
CATTCAGTCG GATTAATTAT GATTGATGTC GATCATTTTA AGGAATTTAA TGATACTTTT
GGTCATAAAG CCGGAGATTT GGTCTTACAA GAAGTCAGTA ACTTTCTGAT GATTAATGTC
CGCAGTGGTG ATATTGCTTG CCGTTATGGA GGTGAAGAGT TTCTTTTAAT TTTACCTGAA
GCTTCTTTAA CGGATAGTCA ACAACGAGCG GAACAAATTA GACAGGGAAT TAAACAACTT
GATTTTAAAC GTTATGACCA ATCTTTTCGC TCTGTTACGG TTTCTGTAGG AGTGGCAAGT
TTTCCCGATC ATGGTACTAA TAATGATCAG TTAATTCAGG CTGCTGATAC GGCTTTATAT
CAAGCTAAAA AACAAGGCCG CGATCGCGTT GTCGTTTTCT CTCCTTTTAT GGAAATGTAA
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| Protein sequence | MNHSQRLSLS ILKMTAICLI VAAIGIYSLY QSSFKQHKQW LVETTQNQAR LIEAIAENSD
NPQIALETVL DQSEKFPGLI HPFDLILIQR ENQQIFFLRF DEENNKIDFQ SVPWQRKLSG
ESETFIEDYL GVKVLAAYEP IEPYNWGIIA QIPLNQIRAP FLMAGLYTLL AALIVNSLSG
ILGLRLGSSR GEQIEENEAL NEANEQLRRE INQRERFETA LRREIDLLAR IMETSPVGIM
MVNSQGEIIL ASEQAEQVLG LSLTQTEQPY NILEWRISDE EGNSLPPEDS PFQGVIRTEQ
SISRVRYWIE LPNEQNILVS ISASPLLNTE NQIQGVVLTL EDITERVQVE SALIHSEAQF
RAIFEQAAVG IGIVSLSGQY IRVNQRYCEL VGYSQKELLL KTYQEITHPD DLSKNLELVS
HLLLGEIQTG SIEKRYICKN GQIQWVNLTA STVSDAQNNP EYLIGIVEDI SERKRAEEAL
RDSEERFRSI FKQAAVGIVQ VSLSGKFILV NDKFVDLVQY SVAELQEKTF QEITHSDDLP
QELNYIQQML RGEIDDFSLE KRYICKDGSL VWGHLSGSLV RNTEGEPMYF IGIIEDIRER
KQAIEDLRQS EEQYRRIIET TAEGVWIIDQ ENKTTFVNHR MAQMLGYTID EMKGKSMLDF
VDAQEQEMVA NHIERRRQGV MEYRDFKFIR SDGNYLWAMI ATNPIYDSVG HYVGALGMLT
DITERKQTEE TLQQVNEQLT ARVSELEQRH QDILLLNQVN DFLQACLNIK EAYQVIGELL
QPLFPGCSGG LYMLNSSKTV VEEVATWGEH LSSKNLFTFD ECWALRRGYI HWVKPSQRSL
FCTHTHVTPD LVETLCVPMM AQGQAVGLFY LSASEPDKLS EVKQQLARAV SEHISLALVN
LQLRESLKAQ SIKDSLTDLY NRRYMEESLK REISLAQRKQ HSVGLIMIDV DHFKEFNDTF
GHKAGDLVLQ EVSNFLMINV RSGDIACRYG GEEFLLILPE ASLTDSQQRA EQIRQGIKQL
DFKRYDQSFR SVTVSVGVAS FPDHGTNNDQ LIQAADTALY QAKKQGRDRV VVFSPFMEM
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