| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3387 |
|---|
| Symbol | |
|---|
| ID | 7112002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 3782082 |
|---|
| End bp | 3783509 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643481629 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002378650 |
|---|
| Protein GI | 218440321 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.0724765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTT TTACAACTCA ACGCTCTAAA GTAGACTCCC CAGAGGGTTT AGACTTAAAA
ACTAAACTCG CCTATGGTGT AGGGGAGTTA AGTAATGCCT TACCGAGTAA TATCTCTATC
TTCTTTTTCC TATTTTTTCT CACTAATGTG GCCGGCTTAA ATGCGGGTTT AGTAGCTAAT
ATTGTTCTTG TGAGTAAGCT TTGGGATGCT ATTAACGATC CTTTAATTGG ATGGTTTAGT
GATCGCATTC GTTCCCCGTT TGGTCGGCGT TATCCTTTAA TGGTATTAGG GGCAATTCCT
TTAGGATTTT TCTTTGCTTT AATTTGGTTT GTGCCTTCAG TTCCGAATCA AAATTTACTT
TTTTTCTATT ATCTTATTGT CGGTTTTTTT TACGATATTT CTTTTACTTC TGTCGTTTTA
CCTCTTAATA CTTTAGCCTC GGAATTAACT CAAAAATACC ATGAACGCAC AACCCTAGTC
AGTTTTAAAT CAGCCTTTGC TATTGGAGGC AGTATTTTTT CTTTAATTTT AGCTCAACTT
ATTTTTAGTT TTATTGATGA TAAAAAACAG CAATTTTTAA CGTTAGGAGT AACAGCCGGA
ATTATTGCGA TCGCGGTTAT TTATTTATGT GTGGCGGGAA CTTACCACCG TTATCAATTA
ATCCAAAAGA CTCGACCGGC TTTAAGTGCT TCTCCTCCTG ATTTACCCTT TTGGCAACAG
TTAAAAATTG TTTTTAGTAA TCGTCCTTTC TTATTTGTGA TGGGAATTTA TCTCTGTTCC
TGGTTAAGTT TACAGACAGT TGGAGTTATT TTATCTTATT TTGTGATTAA TTGGATGGGA
TTACCAGAAA CTCATTTTAC TCAAATGGCT TTAGCTGTGC AAGGAACGGC TTTAGGTATG
ATGTTTGTTT GGAGTTTTTT AAGTCGTAAA ATCGGCAAAA AAGAAATATT TTGTTTAGCG
ATTCCTGTTA CTGTTATTGC CATAACTGGG TTATTTTTTC TTCAACCGGG ACAGATTGTT
TTAATGTATC TGATTGGGGT GATGGCCGGG TTAGGATTAT CGGCAGCTTA TATCGTTCCT
TGGTCTATGT TACCTGATGT GGTAGATCTT GATGAATTAA ATACTGGGTA TCGTCGAGAG
GGGGTTTTTT ATGGGTTTAT GGTGCAATTG CAAAAACTGG GGATAGCGTT AGGACTCTTT
TTAGTCGGGA AAATATTAGA AGCATCGGGT TATATTTCTA CCACATCTGA ACAGTCTAAT
ATTGTACAAC CTGAGTCAGC TTTATGGGCG ATTCGATTAA TTATTGCTCC CATACCGGCT
TTACTTTTAA TTATTGCTTT AGTCTTGGCT TTTTTCTATC CGATTACTAA ATCGGTTCAT
GATAAGATTT TACTCCAACT CTTTGAAAAA CGAAAAACCC TAACTTAA
|
|---|
| Protein sequence | MNSFTTQRSK VDSPEGLDLK TKLAYGVGEL SNALPSNISI FFFLFFLTNV AGLNAGLVAN
IVLVSKLWDA INDPLIGWFS DRIRSPFGRR YPLMVLGAIP LGFFFALIWF VPSVPNQNLL
FFYYLIVGFF YDISFTSVVL PLNTLASELT QKYHERTTLV SFKSAFAIGG SIFSLILAQL
IFSFIDDKKQ QFLTLGVTAG IIAIAVIYLC VAGTYHRYQL IQKTRPALSA SPPDLPFWQQ
LKIVFSNRPF LFVMGIYLCS WLSLQTVGVI LSYFVINWMG LPETHFTQMA LAVQGTALGM
MFVWSFLSRK IGKKEIFCLA IPVTVIAITG LFFLQPGQIV LMYLIGVMAG LGLSAAYIVP
WSMLPDVVDL DELNTGYRRE GVFYGFMVQL QKLGIALGLF LVGKILEASG YISTTSEQSN
IVQPESALWA IRLIIAPIPA LLLIIALVLA FFYPITKSVH DKILLQLFEK RKTLT
|
|---|
| |