Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3313 |
Symbol | |
ID | 7111922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3709091 |
End bp | 3710977 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643481557 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_002378580 |
Protein GI | 218440251 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.711705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT CTTGGAGAAC AATCCTACTC TGGACAATAC CCCTGCTAGT CGTCGGGTTT TTCCTGTGGC AAGGAACATT TACCCCCGCC AGCAGCATGA TAGGGAATAA CACCGCCAGT ACCCGCATGA CCTACGGACG CTTTTTAGAA TATGTAGAAG CCGGACGGGT TCTATCGGTC GATCTCTATG AAGGGGGACG AACCGCGATC GTGCAAGCTG TCGATCCACT GATTGAAAAT CAAGTCCAAC GGTTGCGGGT AGATTTACCC TCTAATTCTC CAGAATTAAT CTCTAAGTTG ACCGAAAGAG GAGTTAGCTT AGATGTGCAT CCCATACGCA ATGATGGCGC ATTATGGGGA TTTTTAGGCA ACTTACTCTT TCCTATACTC CTGATAGCTG CCCTATTCTT CCTCTTCCGC CGGTCTAGCA ATATCCCCGG TGGACCCGGT CAAGCGATGA GTTTTGGGAA ATCTCGCGCC CGTTTCCAAA TGGAAGCCAA AACCGGCATT ATGTTTGATG ATGTGGCCGG CATTGACGAA GCGAAAGAAG AATTACAAGA AATTGTTACC TTCCTCAAAC AGCCAGAAAA ATTCACCGCC GTTGGGGCAA GAATTCCGAA AGGGGTGTTA TTAGTCGGGC CTCCCGGAAC CGGTAAAACT TTATTAGCCA AAGCGATCGC CGGAGAAGCC GGTGTCCCTT TCTTTAGCAT TTCTGGATCT GAATTCGTCG AAATGTTTGT CGGGGTAGGG GCTTCAAGAG TCAGAGATTT ATTTAAAAAG GCTAAAGAAA ATGCTCCCTG TTTAATTTTT ATCGATGAAA TTGACGCAGT CGGTCGTCAA CGGGGCGCAG GAATTGGTGG CGGAAACGAT GAACGGGAAC AAACCTTAAA CCAACTCTTA ACGGAAATGG ATGGGTTTGA AGGCAATACC GGCATTATCA TTATTGCAGC GACCAACCGT CCTGATGTTT TAGACTCTGC TTTAATGCGT CCGGGACGGT TTGACCGTCA AGTGATTGTG GATGCTCCCG ATGTTAAAGG ACGTTTAGCC ATTTTAGAAG TTCACGCCCG CAATAAAAAA CTAGCCCCAG AAGTCGTCTT AGATGCGATC GCCCGTCGGA CTCCTGGGTT TAGCGGGGCA GACTTAGCCA ACTTACTCAA CGAGGCCGCT ATTCTCACCG CCCGTCGTCG CAAAGAAGCC ATTACCATGT TAGAAATTGA CGATGCTATC GACCGGGTAA TTGCGGGAAT GGAAGGAACT CCCCTAGTTG ATAGTAAGAG TAAGCGCTTA ATTGCTTATC ATGAAGTCGG TCATGCGATC GTCGGGACAT TGTTAAAAGA TCACGATCCG GTGCAAAAAG TGACCTTAAT TCCGAGGGGA CAAGCACAAG GATTAACTTG GTTTACCCCC AATGAAGAAC AAGGCTTAAT CACCAAAGCC CAAATTATGG CCCGCATAGC CGGGGCGATG GGAGGTCGTG CCGCAGAAGA GGAAATCTTT GGCTATGATG AAGTGACGAC CGGTGCCGGT GGAGACTTAC AACAAGTGAC CGAAATGGCA CGTCAGATGG TCACTCGTTT CGGGATGAGT GATTTAGGGC CGTTATCCTT AGAAAGTCAA AACGGAGAAG TCTTTTTAGG GGCGGGGTTA ATGACTCGCG CGGAATATTC GGAAAAGGTG GCTACCCGCA TTGACGATCA AGTCCGGGCA ATCATCGAAC ATGGTCATCA AATGGCTAGA CAGATTATTC GAGATAATCG TGAAGTTATT GACCGGATGG TGGATTTATT AATCGAGAAA GAAACCATCG ACGGTAAAGA ATTCCGTCAG ATTGTCTGTG AATATACGAA TGTTCCTGAA AAAGAGCAAT TACTTCCTCT GCTGTAA
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Protein sequence | MKISWRTILL WTIPLLVVGF FLWQGTFTPA SSMIGNNTAS TRMTYGRFLE YVEAGRVLSV DLYEGGRTAI VQAVDPLIEN QVQRLRVDLP SNSPELISKL TERGVSLDVH PIRNDGALWG FLGNLLFPIL LIAALFFLFR RSSNIPGGPG QAMSFGKSRA RFQMEAKTGI MFDDVAGIDE AKEELQEIVT FLKQPEKFTA VGARIPKGVL LVGPPGTGKT LLAKAIAGEA GVPFFSISGS EFVEMFVGVG ASRVRDLFKK AKENAPCLIF IDEIDAVGRQ RGAGIGGGND EREQTLNQLL TEMDGFEGNT GIIIIAATNR PDVLDSALMR PGRFDRQVIV DAPDVKGRLA ILEVHARNKK LAPEVVLDAI ARRTPGFSGA DLANLLNEAA ILTARRRKEA ITMLEIDDAI DRVIAGMEGT PLVDSKSKRL IAYHEVGHAI VGTLLKDHDP VQKVTLIPRG QAQGLTWFTP NEEQGLITKA QIMARIAGAM GGRAAEEEIF GYDEVTTGAG GDLQQVTEMA RQMVTRFGMS DLGPLSLESQ NGEVFLGAGL MTRAEYSEKV ATRIDDQVRA IIEHGHQMAR QIIRDNREVI DRMVDLLIEK ETIDGKEFRQ IVCEYTNVPE KEQLLPLL
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