| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3133 |
|---|
| Symbol | tig |
|---|
| ID | 7107919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 3509913 |
|---|
| End bp | 3511352 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643481379 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_002378403 |
|---|
| Protein GI | 218440074 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA CCCAGGAAAA GCTTCCTGAC AGTCAAATCG GGTTAGAAAT TGAAATTTCC
CCAGAAAAGT CCCAACAAAC CTATGAAACG GTGGTTCAAA ACCTTGCACG CACGACACAG
ATTCCTGGGT TTCGCAAGGG AAAAATCCCC CGTCAAGTGT TGGTACAACG GTTAGGCTCT
CAGCGTCTAA AAGCCGCCGC CTTAGAAGAA ATCATTCAAT CGAGCTTGCA AGAAGCCGTT
AAACAAGAAT CAATCGAAGT TTTGGGCAAT TATCAACTTC GCTCAAGTTT TGAAGAACTT
CTAGAAAAAT ATAAACCCGG CGAAAGCTTC TCGTTTTCCG CTTCGGTGGA TGTTCCCCCA
ACCGTTCAAT TGGGAGACTA CCAAAGTCTA CAAATTAAAG CCGAAGAAAC CCCTTATGAT
CCTCAAAAAG TAGACGCATG GTTCGACGAA CAACGAGAAA AATTTGTGAC GTTAGTTCCC
GTTGAAGAGC GTTCGGCGCA AATGGGAGAT GTAGCGATCA TCGATTATCA AGCCAAAAAA
GCCAGCGAAA CCGAAGGAAA CGAGTTAGAA CCGATTCCAG GAGTAGAAGG GACAGATTTC
CGAGTAGAAC TCGGTGAAGG GCGCTTTATT AGTGGGTTTG TCGAAGGAAT TGTTGGGATG
AAACCCGATG AAACTAAAGA CATTACCGCC ACTTTTCCCT CAGATTATCC TCAAGAAGAA
TTAGCCGGTC AAGAAGCGAT CTTTACGGTA ACTTTAAAAG AACTTAAAGA AAAAGAACTT
CCTGAACTCG ACGATGATTT TGCCGAACAA TTAGCGGAAA ACAGTGAGCA AAAATTTGAA
ACTTTAGCCG AGTGGCGAGA CTATCTAGAA AAACAAGTTC AAGAACAAGC AGAAAACGAG
ACTAAAAATA GCATTCACGC CGCTATTATT AAAGAATTAG TCAATATTAG TAGTGTGGAT
GTCCCCGAAA CCCTCATCCA AGACGAAGTC ACAGAACTCC TGCGACAAAC CGCCGTACAA
ATGCAACAAA TGGGGGTAGA TATTAAAACT CTATTCACCC CAGAAAATGT CAACCGGATG
CGGGAAAATG CTCGTCCTGA AGCAATAGAA AGACTCAAAC AAACTTTAGT GCTTCGAGAA
GTGGCCAAAG TTGAATCCCT CCAAGCGGAT ACAGAAGCGA TCGAAGAAAG ATATAACAAG
CTTGTTTCAC AATTAGAAGG CCAAGATATC GATCTAGAGC GCTTACGAGA AGTGATCACC
GAAGAAATAC TGACTCAAAA AACCCTCGAT TGGCTACAAG AAAAAGCAAC GGTAGAATTA
GTTCCTAAAC AAACCTCCGA CACCGAGGAA GAAACAGAAC TCGATCCAGG AGACGAGACT
ATCATTGAAA CCGTAGCCGA AACTGTAGAG TCTTCTGAAG AGAGTTCAGA GGAATCTTGA
|
|---|
| Protein sequence | MKVTQEKLPD SQIGLEIEIS PEKSQQTYET VVQNLARTTQ IPGFRKGKIP RQVLVQRLGS
QRLKAAALEE IIQSSLQEAV KQESIEVLGN YQLRSSFEEL LEKYKPGESF SFSASVDVPP
TVQLGDYQSL QIKAEETPYD PQKVDAWFDE QREKFVTLVP VEERSAQMGD VAIIDYQAKK
ASETEGNELE PIPGVEGTDF RVELGEGRFI SGFVEGIVGM KPDETKDITA TFPSDYPQEE
LAGQEAIFTV TLKELKEKEL PELDDDFAEQ LAENSEQKFE TLAEWRDYLE KQVQEQAENE
TKNSIHAAII KELVNISSVD VPETLIQDEV TELLRQTAVQ MQQMGVDIKT LFTPENVNRM
RENARPEAIE RLKQTLVLRE VAKVESLQAD TEAIEERYNK LVSQLEGQDI DLERLREVIT
EEILTQKTLD WLQEKATVEL VPKQTSDTEE ETELDPGDET IIETVAETVE SSEESSEES
|
|---|
| |