| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2659 |
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| Symbol | |
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| ID | 7107611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 2943347 |
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| End bp | 2945044 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643480910 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002377939 |
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| Protein GI | 218439610 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.144865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCTC CTCACCTAAA ACCTAAATCT TCTCCTAATG GCAAGTTTTT TAGGTTGCTT
GTTTTGGTCT CTCTTCTCAT TGCTGCGCCT CTGTTGACTC TTCAGGTAGC GGCTAGAGTC
TATTTAATGC AGGGCGATCG CTTTTTGGCT CAAAATCAAC TTGAAAAGGC GATTAATTCT
TACTCCACCG CCACTAAATT ACAGGCTAAT TTTGCTACGG TTTATCTTCG TTTAGGAAAA
GCGTTACAAA AAAATCAACA GTTTACTGAA GCTTTAAAAG CCTACAATCA AGCTTTTTTA
ATTAATCCTG ACTTAACGGT TCAATCTGAT TTAGCCTCTG ATTTAACTCG TTTAGGGGCT
GTTCTCTTAA AAAAGGGCAA TGTATCAGAA GCGATTATAG CCTATCAAAT CGCGGTTGCT
ATTGATCCGT TAGCTATAGA AGCTAATCAT AACTTAGGAA AAGCATTAGC TCAACAACAA
CGTTGGCAAG AAGCAGGACA AGCGTTTAAT CAAGTTATTC TATTTGACCC TGATAATGCT
CAGGCCTATA CTAACCTGGG TAATGCTCTG TTTAAACAAG AAAAATGGCA CGAAGCGAAA
AAAATTTATG AAAAAGCGCT TGAATTAACT CCTAAAGATG CCTTAATTCA TCAACGTTTA
GCAGAAATTC TGGTTGAGAT TGGAGAATTT AACAGTGCTG AAACCCTCTA TTTAAAAGCT
CTTGCCCTTG CCCCTAACCA AGGCGATTTA TATAATGGGT TGGGTCAGGT TTTATACGAA
CAAAAAAAAG TAGACGAGGC AATTAACGCT TATCAAAAAG CTATAAAACT TAGCCCTAAT
AACCCTGAAA TTTATAAAAA TTTTTGTTTT GCTCGTCATA CTCAACATCA ATATGAAGAA
GCTTTAAAAT TATGCCGCCA AGCCATGACC TTAAATCCTG CGGAAGGAGG GGCCAAATTT
TATGTCATGG AAGTTGAACG CGCTTTAGCT ATCCTGAAAA ACCCAAACCT CTTACAGATG
CCAGAGCGTA TCCCTAGCCC TCAAACCGAT CCTTACATAT CATATAAACG CTCTATTGTC
AAGGTAGTGA TCAAAAGTTC CAATTATCAA GGGGTGGGAA CCGGATGGGT GCTTAAACGA
GAGGGAAAAA ACGCTCTTAT TGTCACTAAC CGTCATGTAG TCACCAATCC GGAGCAAAAA
CAGGAGCAAG ACGCTAAGAT TGAGGTAGAG TTGTATAGTC AACCCCCCGC CGGTCAAATT
CGCAAACGAA TTCCGGCTCA TTTGCTCGAA AAAACAGACC CTAATGATTG GTTAGATATA
GCTGTTTTAA AAGTAACGGA TTTGCCCCAA GATATTCAAC CTTTATCTTT ATCTTCCGTT
TCTCCCCCAG AGGCGAGTAA AATTGAAGTC ATCGGACATC CCATTACAGG AGATGATTGG
TCAGTTGCTT CGGGACAGGT ACAATCTGTC ACAGAGCAAG AATTATATTT ATCTGTAGTT
TTAGCATCAG GGAATTCTGG GGGGCCGGTT TTAGATTCTA ACTATCAGGT GATTGGCGTT
GTGGTTAAGG CCGGGTTATT TTGCCCACAG ACTTCAAGCA ATAATCAAAT TAATGTATCC
TTGTTAAATA AATTAGGCTG TGGGATCGCT TTTCCTATCG AATTAGTCCA AGAAAGATTG
AATCAGTGGG GAATTTAA
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| Protein sequence | MRSPHLKPKS SPNGKFFRLL VLVSLLIAAP LLTLQVAARV YLMQGDRFLA QNQLEKAINS
YSTATKLQAN FATVYLRLGK ALQKNQQFTE ALKAYNQAFL INPDLTVQSD LASDLTRLGA
VLLKKGNVSE AIIAYQIAVA IDPLAIEANH NLGKALAQQQ RWQEAGQAFN QVILFDPDNA
QAYTNLGNAL FKQEKWHEAK KIYEKALELT PKDALIHQRL AEILVEIGEF NSAETLYLKA
LALAPNQGDL YNGLGQVLYE QKKVDEAINA YQKAIKLSPN NPEIYKNFCF ARHTQHQYEE
ALKLCRQAMT LNPAEGGAKF YVMEVERALA ILKNPNLLQM PERIPSPQTD PYISYKRSIV
KVVIKSSNYQ GVGTGWVLKR EGKNALIVTN RHVVTNPEQK QEQDAKIEVE LYSQPPAGQI
RKRIPAHLLE KTDPNDWLDI AVLKVTDLPQ DIQPLSLSSV SPPEASKIEV IGHPITGDDW
SVASGQVQSV TEQELYLSVV LASGNSGGPV LDSNYQVIGV VVKAGLFCPQ TSSNNQINVS
LLNKLGCGIA FPIELVQERL NQWGI
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