| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2632 |
|---|
| Symbol | |
|---|
| ID | 7107583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 2913716 |
|---|
| End bp | 2916412 |
|---|
| Gene Length | 2697 bp |
|---|
| Protein Length | 898 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643480884 |
|---|
| Product | Phycobilisome linker polypeptide |
|---|
| Protein accession | YP_002377914 |
|---|
| Protein GI | 218439585 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.650102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTA AGGCAAGTGG TGGAAGCTCG TTAGCACGAC CCCAACTATA CCAGACTGTA
CCAGTCTCTG CCATTACCCA AGCAGAACAA CAAGATCGCT TTCTGGAAAA GGCAGAACTC
AATGAGTTGG TCGCCTATTT CCGTTCTGGA AACAAACGGA TAGAAATCGC ACAGACGTTA
ACCAATAACT CCGATCTGAT CGTTTCCCGT GCTGCTAATC GGATCTTCAC GGGTGGATCA
CCGATGTCAT ACCTGGAAAA GCCCGTAGAA GCACCCGAGC CAATGTTAGC TATGGCCGCG
GCGGGAACAC AACCAGTAAG AGATTTAGGC ACTGTCACCT ATGTTGAAGG TGGTGGCGGT
GGGAGTGGAT TATTTGGGGG TTTGCGTTCT ATTTTTACCT CCAGTGGCCC TATTCCTCCG
GGTTTTCGTC CGATCAATGT TTCCCGCTAT GGCCCTAGCA ATATGCAGAA GTCTCTGCGG
GATTTATCTT GGTTCTTGCG CTATCTAACC TATGCGATCG TCGCCGGAGA TCCTAATATT
ATCGTGGTCA ATACGCGCGG ACTACGGGAA GTGATCGAAA ATGCTTGCTC GACTGATGCG
ACTTTGGTTG CTTTACAGGA AATGCGAGCT TCATCGATCG AATATTTCCG CCGGGATGAA
GAAGCGAAAG GGATTGTTAC TCAATACTTC GATATCCTGA TTAATGAATT TAAAGCTCCA
ACTCCGGCGA ATAAACTCCG TCAGCGTCCT TCTTCGGATC AACAGGGGTT AGAACTGCCT
CAAAGTTATT ACAATGCGGC AGAAAAACGG CAAAAATTTG TGATGAAGCC GGGATTATCT
GAGACTGAGA AAAACTCTGT CATTAAGGCG GCTTACCGGC AAATTTTTGA AAGAGATATC
ATTCGCGCTT ATAGTCAATC CATTTCTTAC CTAGAATCTC AGGTTAAGAA TGGGGACATT
TCCATGAAGG AGTTTGTTCG CCGTTTGGCT AAATCTCCTT TGTATCGGAA ACAATTTTTT
GAACCGTTTA TCAATAGTCG TGCCTTAGAA TTGGCTTTCC GTCATATTTT AGGTCGCGGA
CCCAGTTCTC GGGAAGAAGT TCAAAAATAT TTCTCGATCG TCTCGCAAGG GGGATTATCT
GCCTTAGTTG ATGCTTTGGT AGATTCTCAG GAATATTCCG ACTACTTCGG AGAAGAAACT
GTGCCCTATC TACGGGGACT CGGTTTAGAA GCGCAAGAGT GTCGCAATTG GGGAATGCAG
CAAGATCTGT TTAATTACAG CGCTCCGTTC CGGAAAGTTC CTCAGTTTAT CACTACTTTT
GCTCAATATA ACCGTCCTTT ACCGGATCAG CACGTTTACG GGTCGGGAAA TGATCCTCTA
GAAATTCAAT TCGGGGCAAT TTTCCCGAAA GAAACCCGTA ATCCTAGCTC TAGTCCGGCT
CCCTTTAGTA AAGATACCCG TCGGATTTTA ATTCACCGAG GCGCAGGAAT TAACAACCAG
GTGAGTAATC CTGGGGCGCG AGGAGAGTTT CCGGGGTCTT TAGGGCCTAA AGTATTCCGC
TTGAATAATG AACTCCCCGG CAGCAGCAAC GGAACGAGTG TTAAATTTGG GGAAAGTTCG
ACCCAAGCCC TAATTTTAGC GGCTTACCGT CAGGTTTTTG GACGAATGCC TTATGAAGGT
CAGCGTCTCT CTGTCCCTGA AATTAAGCTA GAAAACGGAG ATATTACGGT TCGGGAATTT
ATCAAGCTTT TGGCTAAGTC TGAAACGTTC CGTAAGCTGT ACTGGACTCC TTTCTATGTG
GTTAAAGCGA TCGAGTATAT TCACCGTCGT CTGTTAGGTC GTCCGACCTA TGGTCGTCAG
GAAATGAATC AATACTTTGA TATTTGCGCC AAGAAGGGTT TTTATGCTCT GATTGATGCC
ATTATTGATT CTCCTGAGTA TACTGAAGCC TTTGGGGAAG ATACCGTTCC CTATGAGCGT
TATTTAACTC CCGCAGGAAT GCAATTACGG ATGGCGCGTC CTGGTTCTAT TCGGGAAGAA
ATCGGTCGTC GGGTTGAGAA AGAAGTTACT CCTCGGTTTG TGGAATTGGG TCAAGTTTCA
CAAATACGTA CTGAACCTGA TATCAAATCA CGCATTAATC AAGGGGTTAA TTCTATCCGC
GCTCAAAGTA AAGTCTTTAA ACTGCTTTCT AATTTGGATA AAGTGGCGGT TCAAAACACA
GTTAAAGCCG CTTACCGTCA AATTTTTGAG CGAGATCTCG ATCCTTATAT TATTCAAGCA
GAATTTACCG CTCTTGAAAG TAAACTCAGT AACGCAGAAA TTACGGTTAA AGAGTTTATT
GAAGGGTTAG GCTGTTCTGA CCTTTATGTT AAGGAGTTTT ATGCTCCCTA TCCTAATACA
AAAGTGATTG AGTTAGGAAC TAAGCACTTT TTAGGTCGTG CGCCTCTGAA TCAAAAAGAA
ATTCAGAAGT ATAACCAAAT TTTAGCAACC CAAGGTATTC GTGCCTTTAT TGGGGCAATG
GTTAACTGTA TGGAGTATCT CCAAGTGTTC GGAGAAGATA CTGTTCCTTA TCGTCGTTTC
CCCACTTTAC CGGCGGCTAA TTTCCCCAAT ACGGAACGGT TATACAATAA GCTCACCAAA
CAAGATAATG AGTTAGTTGT TCCTAGTTTT AAACCGGTTG TTAAAGTCGG CGGATAA
|
|---|
| Protein sequence | MSVKASGGSS LARPQLYQTV PVSAITQAEQ QDRFLEKAEL NELVAYFRSG NKRIEIAQTL
TNNSDLIVSR AANRIFTGGS PMSYLEKPVE APEPMLAMAA AGTQPVRDLG TVTYVEGGGG
GSGLFGGLRS IFTSSGPIPP GFRPINVSRY GPSNMQKSLR DLSWFLRYLT YAIVAGDPNI
IVVNTRGLRE VIENACSTDA TLVALQEMRA SSIEYFRRDE EAKGIVTQYF DILINEFKAP
TPANKLRQRP SSDQQGLELP QSYYNAAEKR QKFVMKPGLS ETEKNSVIKA AYRQIFERDI
IRAYSQSISY LESQVKNGDI SMKEFVRRLA KSPLYRKQFF EPFINSRALE LAFRHILGRG
PSSREEVQKY FSIVSQGGLS ALVDALVDSQ EYSDYFGEET VPYLRGLGLE AQECRNWGMQ
QDLFNYSAPF RKVPQFITTF AQYNRPLPDQ HVYGSGNDPL EIQFGAIFPK ETRNPSSSPA
PFSKDTRRIL IHRGAGINNQ VSNPGARGEF PGSLGPKVFR LNNELPGSSN GTSVKFGESS
TQALILAAYR QVFGRMPYEG QRLSVPEIKL ENGDITVREF IKLLAKSETF RKLYWTPFYV
VKAIEYIHRR LLGRPTYGRQ EMNQYFDICA KKGFYALIDA IIDSPEYTEA FGEDTVPYER
YLTPAGMQLR MARPGSIREE IGRRVEKEVT PRFVELGQVS QIRTEPDIKS RINQGVNSIR
AQSKVFKLLS NLDKVAVQNT VKAAYRQIFE RDLDPYIIQA EFTALESKLS NAEITVKEFI
EGLGCSDLYV KEFYAPYPNT KVIELGTKHF LGRAPLNQKE IQKYNQILAT QGIRAFIGAM
VNCMEYLQVF GEDTVPYRRF PTLPAANFPN TERLYNKLTK QDNELVVPSF KPVVKVGG
|
|---|
| |