Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2607 |
Symbol | lpxC |
ID | 7107558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 2888639 |
End bp | 2889520 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643480859 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_002377889 |
Protein GI | 218439560 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCTC ACACCATTAA AAAACCTTTT GAACGCTCAG GAGTTGGCTT ACATTCAGGA ATAACCACTC AGGTTAAAGT CTTGCCAGCA AAGCCGGGTG AAGGTCGTTA TTTTGTTCGA GTCGATTTGC CACAACAGCC GATTATTCCG GCTAAATTAG CCTATGTTAA CCAAACTCCC CTATCGACTG AGTTGAAATC CCCTCAAGGC AGTGTCCGAA CTGTAGAACA TTTATTAGCG GCTCTGTCCG GCAGTGGAAT TAATGATGTC AGAATTGAAA TTGATGGCCC TGAAGTGCCT TTACTCGATG GTTCGGCTCA ACAATGGATA GAAGCGATCG CCTCAGCCGG AATGATAGAA TTAACCGATG AAGAGACTAC CCCTACAGTC ATGATCTCTT CCCCCATCTC GGTACAAGAA GGGGATGCTT TTGTGTTAGC TTTACCGGCT CGGGAACTTC GCTTTACCTA TGGGATCGAT TTTGCTTATA GTGTTATAGG GAATCAATGG TATAGTTGGA ATCCTGCGAG TGAATCTTTT GCCGAAGCGA TCGCACCGGC TCGGACATTT GGTTTTGCCG ATCAAATCGA ATCTTTAAAA CAGGCAGGAT TAATTAAGGG GGGAAGTTTA GAGAATGCTT TAGTGTGCGA TCATCAAGGT TGGGTTAATC CGCCGTTAAG GTTTTCAAAT GAACCAGTTC GTCATAAACT GTTAGATTTA GTGGGAGATT TAAGTTTACT AGAAACAATT CCTCTGGCTC ATTTTCTGGC TTATAAAGCG AGTCATAAAC TTCATATTGA ATTAGCCAAG GCCATACATG GTACTGTCAA AGTAAGCGAA CACCACTTTA AGGGCTTTCC AGAGAACGCT CTTACTTCCT AA
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Protein sequence | MRSHTIKKPF ERSGVGLHSG ITTQVKVLPA KPGEGRYFVR VDLPQQPIIP AKLAYVNQTP LSTELKSPQG SVRTVEHLLA ALSGSGINDV RIEIDGPEVP LLDGSAQQWI EAIASAGMIE LTDEETTPTV MISSPISVQE GDAFVLALPA RELRFTYGID FAYSVIGNQW YSWNPASESF AEAIAPARTF GFADQIESLK QAGLIKGGSL ENALVCDHQG WVNPPLRFSN EPVRHKLLDL VGDLSLLETI PLAHFLAYKA SHKLHIELAK AIHGTVKVSE HHFKGFPENA LTS
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