Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2261 |
Symbol | |
ID | 7111329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 2519618 |
End bp | 2520373 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643480519 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002377551 |
Protein GI | 218439222 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.000463811 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTCAAC TCTTTTTACT ATTGTTGCTC AATATTGGTT CACTCTTTCT AGTGGGATGT CAAGCGGTTA AGCCTCCTGA GTCAGAAACG GTGATCTCTC CTTCTCCTGC TGTTGCTCCG ACTCCTCCTA AACCTTCCGC CGAAGAGGTT AAAGCCGCCA GCGAGTATCG ACAATTGGGG CTGGAATATC GTAGTCAAAA GCGTTATCCT GAAGCGATCG AGGCTTTATC TAAATCGGTG AATCTCGATC CTTATAATCT CTCTGGTGGG GTCATTTACG GTTGGACGTT ACATTTAGCC GGTAAACAAC CAGAAGCGAT CGCCGCACTG CAAAAAACCT TAAGTCTCGA TCCTAATCAT GTGCCGGCTT TAAATGCCTT GGGAATTGTT TATTTAGTGA GTGGAAATTT ACCCTTGGCG GTAGAGACTC ACCATCAAGC GATCAAACTT AAACCGGCTA ATGAAATAGC CCATTATAAT CTCAGTTTAG CTTATCATCG TCTTAAAAAT TATGACCAAG GGATTATTCA TGGTCAAGAG GCGACGGTTT TAGAAGCGGA TAATCCTCAT CCTTGGGTAA GTTTAGCTTT AATTTATTGG GATAAAGGGG ATAAATCTCT AGCCCAACAA ACTTATCAAA AAGCGATCGC TCTCGATGGG CGCTATCGGG AAAGATGGTT TTTAGATCAT TTAAAAGAAG CCGGATTTAC TGTAGAACAA ATTGACACCG TTGAGGCAAT TCGCCAATAT CAATAA
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Protein sequence | MFQLFLLLLL NIGSLFLVGC QAVKPPESET VISPSPAVAP TPPKPSAEEV KAASEYRQLG LEYRSQKRYP EAIEALSKSV NLDPYNLSGG VIYGWTLHLA GKQPEAIAAL QKTLSLDPNH VPALNALGIV YLVSGNLPLA VETHHQAIKL KPANEIAHYN LSLAYHRLKN YDQGIIHGQE ATVLEADNPH PWVSLALIYW DKGDKSLAQQ TYQKAIALDG RYRERWFLDH LKEAGFTVEQ IDTVEAIRQY Q
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