| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2179 |
|---|
| Symbol | |
|---|
| ID | 7108909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 2424286 |
|---|
| End bp | 2427318 |
|---|
| Gene Length | 3033 bp |
|---|
| Protein Length | 1010 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643480432 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002377469 |
|---|
| Protein GI | 218439140 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0019283 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATC TATTAGAGTG GCAAAATAGT TGTGTTGATG AGGAATTAAT CCGACTCAAT
GTCAGCGCTT TAGATGGTGA TACCCCAAAA GAATACCTTC TCTACTCGGA TAATCTCCCC
AGACGTAACG ATGGACGAGT TAGTCATTAT CTCCTGAAAC GTTATCAACA CACTCAAGAG
GGGGGATGGT GGTGTTCTGG TGTCAATCTC CTCACGGGAG AAGATGATTT ATGGGGATGT
TTTAAACCTA ATGTTCCTCG CTACAGCTTA GATCAAAAGA AACTCATTAA ATATGAACAT
CCTCCCCAAA CTCCTACCGG TCTCTTTGCC TTGCGTGTTC CTCAACATCT CTGGCAGGGG
ATCGCCGATA AATCTAAGAT AGATACTATA CCACAAGATA TCAACGAAAG TCAAGAAGAC
TTAGGCTTTT GGCAGTGGTT CATGAAACAT CCTACTATTC CATTATGTAT TACAGAAGGG
GCGAAGAAAG CAGGAGCAAT ATTAAGCGCC GGTTATGCTG CGATCGCTTT ACCGGGGGTT
CATAATGGAT ATCGTACCCC TAGAGATGAA GGGGGGCAAC GCATCGGAAA ATCCCATCTT
ATTCCCCAGT TAAAACAATT AGCGACCCCA GGACGAGAAA TTTATATTGT TTTCGATCAA
GATACTAAAC CTTCTACAAT TAAAGTTGTA AATGGGGCAA TTCGTCAATT AGGGTATTTA
CTGACTCAAG CCGGTTGCAC TGTAAAAATT ATCACTTGGA ATCCGAATCA AGGCAAGGGA
GTCGATGATT TAATTGCCAA TGGAGGACAA AAAGCCTTTG ATTTAGCGTA TCAAAAAGCG
CAATCTTTAG AAATTTGGAA AGCACAACAA TTATTTCAAT TAACTTATCC CCCTAGCTTA
GAGATTAACT CTCGATATAT TGACACTATT TCTATTCCTA AAACTGCAAA ACTGATCGGC
ATTAAATCAG CTAAAGGAAC AGGAAAAACC CAATTTTTAG AAAAGATTGT TAAGGAGGCG
ATATCGCGTC AACAATGGGT ATTAGTGATT GGACATCGGG TTAAACTGGT AGAAGAATTA
TGTCATCGAT TTGGATTAAA ATATATTTCC CAAGTGCGAG AGGATGAAGC CGGACAAAAG
TTAGGATATG GGTTATGTAT TGATTCTCTC CATCCTAATT CTCAAGCCCA ATTTAATGCA
CTTGATTGGA CAAATGGAGT TGTTATTATT GATGAAGTTG AACAAGTTCT CTGGCATGGA
TTAAACTCAG ATACTTGTAA AAGTAATCGA GTTGCCATTC TTAAATCCTT AAAAACGTTG
ATGCAAAATG TTTTAGGAGG AGAAGGACAA GTCTATATTG CTGATGCCGA CTTAAGTGAT
ACTTCTCTGG ATTATTTATT GGCTTTAGCC GGGGTTAATT TAGAGCCTTA TGTTATCCAA
AATAACTGGA AACCTACAGA TCAAGAAGCC TGGAAAGTTT ATCATTATAA AGAGACAACC
CCTAAAAAAT TGGTCAAAGA CTTAGTTAAA CATATTCAAC AAGGAGGGAA ACCTTTTGTT
TGTTTATCCG CCCAAAAATT AACCAGTCAA TGGGGAACGT TAACCCTAGA AGCTTATCTA
AACAAATTAT TTCCTGATCT AAAAATATTA CGTTTAGATT CAGAATCGTT AGCTGATCCT
CATCATCCCG CTTATAACTG TATAACTCGT CTTAATGAAG TTTTAGGTTA CTATGATATT
GTCTTAAGCA GTCCCTCCCT TGAAACGGGA ATTAGTATTG ATTTAAAAGG ACATTTTACC
TCCGTTTGGG GGATTGCTCA AGGGGTACAA ACTTCTACCT CTGTCTGTCA AGGATTAAGT
CGAATTAGAG AGAATATTCC TCGTTATATT TGGGTAGCTA ATTATGGATT TAATCAGATC
GGAAATGGAT CGACTTCTAT CCCTAGTTTA TTAACCTCTG GACAACGATT AACCCAGTTA
AATATCCGTC TATTACAACA AGCTGACTTT GAATCTATAG AGGATTTTGA TACAGGATTT
CAAGCAGAAT CTTTATTATG TTGGGCTAAA ATGGCGGTTA GAGTCAATGC TTCGATGATG
AATTATCGAG AGGCAATCTT AGCCACCCTA CAACAAGAAA ACCATCAACT GATGAAAGGG
GTTTCTTCTC CTAAAGAGTC TTCCAAATCC TTAACTAAAA CTTCCCCAAA AAACTCTAAT
TCTTTTAATG AATTAACGGA AGCCATTAAT GAAGTTAGAC AACAAAACTA TCAAGCTGAA
TGTGAGGCGA TCGCCCAAAC TAAAGACTTA AGTGAGCAAG ATTATCTCAG TTTAAAAAAA
AGGCTCAATA AAACCACAAC TCAACGACGA CTTTTAAGAA AATATGAATT AAAAAAACGG
TATAGTATCC CAGTGACTTC TCAATTAATC ATTAAAGACG ATCGAGGATG GTATCAACAA
CTTCGCTTGC ATTATTTTCT CACTATAGGT CGTCCATTTT TAGCCGATCG AGATACAATG
GTGGCGAAAA AATTACTAGA AATTGGTCAT GGTAGCCTAT TTCTTCCCGA CTTTAACGGC
TCACAGTTAG GGGCAATGAT TGGAATTATG GAAGTTTTAG GAGTACCTGT ATTGTTAGGA
GATCCTCAAC GGGAATTACG GAATTTAGAC GAAGATTTAA AAGCGATCGC AGACTTAGCG
TTATCGAATC GAAAAGAAAT TAAAACCGTG ATGGGAATTG GGATTGCTAA AACCGCTAGT
CCAGTGACGA TTATTCGGCA ATTTTTAGAT AAGATAGGCT ATAGTTTAAC TTGTATTCGC
TGTGATAGCT TTGAGAAAAA AAGAGTCAGA GTTTATCAAG TTGTTGTGCC TCATGATGGG
AGAGAAGAAG TTTTTAAACA ATGGTTACTA GCGGATCATA AATATCCTGG AAGTTCTGAA
CTAGGGTTTG AAGATTACGA ATCTTTAATC GGTTTAAACG CTCAAATTGA GAAGAATTGC
TCAACTAAAT ATGTTCAGTT AAGTCTATTT TGA
|
|---|
| Protein sequence | MNYLLEWQNS CVDEELIRLN VSALDGDTPK EYLLYSDNLP RRNDGRVSHY LLKRYQHTQE
GGWWCSGVNL LTGEDDLWGC FKPNVPRYSL DQKKLIKYEH PPQTPTGLFA LRVPQHLWQG
IADKSKIDTI PQDINESQED LGFWQWFMKH PTIPLCITEG AKKAGAILSA GYAAIALPGV
HNGYRTPRDE GGQRIGKSHL IPQLKQLATP GREIYIVFDQ DTKPSTIKVV NGAIRQLGYL
LTQAGCTVKI ITWNPNQGKG VDDLIANGGQ KAFDLAYQKA QSLEIWKAQQ LFQLTYPPSL
EINSRYIDTI SIPKTAKLIG IKSAKGTGKT QFLEKIVKEA ISRQQWVLVI GHRVKLVEEL
CHRFGLKYIS QVREDEAGQK LGYGLCIDSL HPNSQAQFNA LDWTNGVVII DEVEQVLWHG
LNSDTCKSNR VAILKSLKTL MQNVLGGEGQ VYIADADLSD TSLDYLLALA GVNLEPYVIQ
NNWKPTDQEA WKVYHYKETT PKKLVKDLVK HIQQGGKPFV CLSAQKLTSQ WGTLTLEAYL
NKLFPDLKIL RLDSESLADP HHPAYNCITR LNEVLGYYDI VLSSPSLETG ISIDLKGHFT
SVWGIAQGVQ TSTSVCQGLS RIRENIPRYI WVANYGFNQI GNGSTSIPSL LTSGQRLTQL
NIRLLQQADF ESIEDFDTGF QAESLLCWAK MAVRVNASMM NYREAILATL QQENHQLMKG
VSSPKESSKS LTKTSPKNSN SFNELTEAIN EVRQQNYQAE CEAIAQTKDL SEQDYLSLKK
RLNKTTTQRR LLRKYELKKR YSIPVTSQLI IKDDRGWYQQ LRLHYFLTIG RPFLADRDTM
VAKKLLEIGH GSLFLPDFNG SQLGAMIGIM EVLGVPVLLG DPQRELRNLD EDLKAIADLA
LSNRKEIKTV MGIGIAKTAS PVTIIRQFLD KIGYSLTCIR CDSFEKKRVR VYQVVVPHDG
REEVFKQWLL ADHKYPGSSE LGFEDYESLI GLNAQIEKNC STKYVQLSLF
|
|---|
| |