Gene PCC7424_2127 details

Gene Information

• Locus tag: PCC7424_2127
• Symbol: aksA
• ID: 7108856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 2380068
• End bp: 2381216
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643480384
• Product: trans-homoaconitate synthase
• Protein accession: YP_002377422
• Protein GI: 218439093
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0119] Isopropylmalate/homocitrate/citramalate synthases
• TIGRFAM ID: [TIGR02660] homocitrate synthase NifV

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 0.70661
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGAACTA TTCAAATTAA TGATACTACT TTACGAGATG GGGAGCAATC AGCCGGAATC 
GCCTTTACAG CCCCTGAAAA AGTGGCTCTC GCCATCTTAT TAGATGAGAT CGGCATTCAG 
GAATTGGAAG TCGGAACTCC GGCCATGGGA GGTGCTGAAG CCCAAGCCAT CACTGAAATG 
ACTCATTTAG GATTAAAATC TTCTCTTTTA AGCTGGAATC GGGCGGTGCG ATCAGATATT 
TCCGCTTCGA TCGCTTGTGG AATTAAACGA GTTCATATCT CTATTCCGGT ATCAGACATT 
CAAATCTCCG CTAAATTTCA AGGCAATTGC CGTTTAGTTT TAGAGCGTCT GCGAGATAGT 
ATTAACTTTG CCTTAGATAA GGGTTTATAT GTATCGATTG GGGGGGAAGA CTCCTCCAGA 
GCGGATGAAT CGTTTTTGCT TGATGTGGCT CTTTGTGCCC AAGATTGGGG GGCTTCTCGT 
TTCCGTTTTT GTGATACGGT GGGAATTCTC GATCCAGCAA CCACAAGCGA AAAAGTGAGT 
AAATTGGTGA AAGCGTTATC CATCGACGTG GAAATGCACA CCCACAATGA TTTTGGGTTA 
GCCACTGCCA ACGCGCTGGC CGGACTTCAA GCCGGGGCGA CCTCAGTCAA TACAACGGTG 
AACGGGTTAG GGGAAAGAGC CGGCAATGCT GCCCTAGAAG AGGTCGTTAT GGCACTCAAA 
CGGCTTTATA CCATCGATTT AAAGATTAAT ACTCGCCGCT TACGGGAACT GTCCCAATTC 
GTGGTTAAAG CTTCGGGTTA TCCCGTTCCC CCTTGGAAAG CGATCGTCGG CAAAAATGTC 
TTTGCTCATG AATCCGGGAT TCATGTTCAT GGGATTTTAC AAAATCCCTC TACCTATGAG 
CCTTTTACCC CTGAAGAAGT GGGATGGGAA CGACAATTAG TAATCGGTAA ACATTCCGGT 
CGTCATACCC TATTGTCCCT TTTTCAACAA CACGGAATTC ACTTAACCCG TGAAGAAACC 
CAATCGATTT TAGAGCGGGT ACGCCATTTG TCGGTACAAG TCAAACGGGG CTTAACCGTA 
GAAGAATTAC TAAATTTAGT GTCTATTAAG GAGAATAGTT CATGGGATTG TATAACCCCG 
GCGAAATAG 

 

Protein sequence

MRTIQINDTT LRDGEQSAGI AFTAPEKVAL AILLDEIGIQ ELEVGTPAMG GAEAQAITEM 
THLGLKSSLL SWNRAVRSDI SASIACGIKR VHISIPVSDI QISAKFQGNC RLVLERLRDS 
INFALDKGLY VSIGGEDSSR ADESFLLDVA LCAQDWGASR FRFCDTVGIL DPATTSEKVS 
KLVKALSIDV EMHTHNDFGL ATANALAGLQ AGATSVNTTV NGLGERAGNA ALEEVVMALK 
RLYTIDLKIN TRRLRELSQF VVKASGYPVP PWKAIVGKNV FAHESGIHVH GILQNPSTYE 
PFTPEEVGWE RQLVIGKHSG RHTLLSLFQQ HGIHLTREET QSILERVRHL SVQVKRGLTV 
EELLNLVSIK ENSSWDCITP AK