Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_2066 |
Symbol | def |
ID | 7111845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 2319225 |
End bp | 2319788 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643480322 |
Product | peptide deformylase |
Protein accession | YP_002377361 |
Protein GI | 218439032 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.166948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTC TTGTCATTGT CGATAAACAA AAATTAGAAA ATCCTCCCCT AGAAATTCAT TATCTCGGCG ATCGCGTTCT GCGTCAGCCG GCTAAACGTA TTGCTAAAGT TGATGAGAGT GTGCGTCAAT TGGCGAAAGA AATGTTACAA ACCATGTATA GTTCTAATGG GATTGGTTTG GCCGCGCCTC AAGTTGCCGT AAATAAACAA TTGCTCGTCA TCGACTGTGA ACCGGATAAT CCCGCAAATC CTCCCTTAAT TCTCATCAAT CCGCAAATTA CCCAATCTAG CCAAGAATTA TGTCAATTTG AAGAGGGATG TCTCAGTATT CCTGGGGTTT ATCTCGATGT AGTTCGTCCT AAAGTCATTG AAGTGAGCTA TAAAGATGAA AGCGGACGAC CCAAAAAACT CAAAGCGACT GATTTATTAG CCCGTGTCAT TCAGCATGAA ATGGATCATC TCAATGGAAT TATGTTTGTG GATCGGGTCG GGAATAATTT AGCATTAACA ACAGAATTGA AAAAGCATGG GTTCAATGTG CAAGCTGTTA AACCCATTGC TTAA
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Protein sequence | MSSLVIVDKQ KLENPPLEIH YLGDRVLRQP AKRIAKVDES VRQLAKEMLQ TMYSSNGIGL AAPQVAVNKQ LLVIDCEPDN PANPPLILIN PQITQSSQEL CQFEEGCLSI PGVYLDVVRP KVIEVSYKDE SGRPKKLKAT DLLARVIQHE MDHLNGIMFV DRVGNNLALT TELKKHGFNV QAVKPIA
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