Gene PCC7424_2045 details

Gene Information

• Locus tag: PCC7424_2045
• Symbol: smpB
• ID: 7111823
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: -
• Start bp: 2300933
• End bp: 2301400
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643480301
• Product: SsrA-binding protein
• Protein accession: YP_002377341
• Protein GI: 218439012
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 0.524843
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTAACC AAAATGGAAA AACCAAACTA ATCACAGATA ACCGCCAAGC TCGTTTTTTA 
TATGAGATCT TAGAAACCTA TGAGGCGGGA ATTGAGTTAA CAGGAACAGA GGTTAAGTCT 
ATTCGTGCCG GTAGAATTAA CCTTAAGGAT GGCTATGCTC TGATTCGTAA TGGAGAGGCG 
TGGTTAATCA ATGTTCATAT TTCTCCCTAT GAAGCGAGTG GACAATATTT TAATCATGAT 
CCCCGTCGCA CTCGCAAATT GTTGCTTCAT CGTAAAGAGA TTAATAAATT AATAGGACAA 
GTGGAACAAA AGGGCTTAAC TTTAGTTCCA TTAAAAATGT ATTTTAAAGA TAGTTGGGTA 
AAAGTGAGTA TTGGACTCGC TCAAGGGAAG AAACTCCATG ATAAGCGAGA AACTCTTAAA 
CGTCGTCAAG ATGAGCGAGA TATGCAAAGA GCCATGAAAC GATGGTAG 

 

Protein sequence

MSNQNGKTKL ITDNRQARFL YEILETYEAG IELTGTEVKS IRAGRINLKD GYALIRNGEA 
WLINVHISPY EASGQYFNHD PRRTRKLLLH RKEINKLIGQ VEQKGLTLVP LKMYFKDSWV 
KVSIGLAQGK KLHDKRETLK RRQDERDMQR AMKRW