| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2021 |
|---|
| Symbol | |
|---|
| ID | 7111719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 2277005 |
|---|
| End bp | 2281555 |
|---|
| Gene Length | 4551 bp |
|---|
| Protein Length | 1516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643480279 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002377319 |
|---|
| Protein GI | 218438990 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGC CAGAAAAAGC TACCATTCTG ATGGTGGACG ATCAACCTAA TAATTTAAAA
ATATTAAGCG ATATACTACA TATTCTCGAT CAAACTATCA TAGGAGTTAG TTCTAGTCAA
GAGGCAATAG AGTATATAGA TCATCAAGAA TTTGCTGTTA TTATCCTGGA TGTGAATATG
CCAGGAATGA ACGGCTTTCA ATTAGCAGAA TATATCAGAG GTCAACCTCG GATTCAAAAC
ACACCGATTA TGTTTTTAAC CGGGACTGAG ATGAGCGACA TTAGTTACTT TCAAGGATAT
GAACTCGGAG CGGTTGATTA TCTGATTAAA CCTATCTATC CCAAAATTTT TCGGTCTAAA
GTTTCTGTCT TTGTTGAAAT ATTTCGTCAA AAACAAGAGC TTAAACACAA GTTAGAAGAA
ATTGCTCAAG CTAATCAAAA ATTAGAAAAT CAAATTGTTA AGTATAAAAA AGCTCAGTCT
CATTTAGGCT ACTTAGCCAA AAACCTAGAA AATTTAGTTG AACAAAGGAC TCTTGAACTT
CAGACAACTA ACTTTAATCT GTCTGACGAA ATTAAGCAAC GCCAGCGTAT GGAAACAGTC
CTGAGAACGA TGGCTGTAGA ATTTTCAAAA ACCTCAGCAG AAGCTTTTTT CCAATCTTTA
GTTCAATATT TAGTTAAAGC AGAGGAAATA GATTATGCTT TTATTTGCGA GTTGAACGAT
TTCTATGGTG ATGAGACGCA AGGAAAAGCC TTTTTTACTG ATGGAGTCTC AGTTCAAACG
ATTGAATACA ATTTAATCGA TACCCCTTGC CTAGAAACCT TAAAAAGCCA TTTTTGTATT
TACCCAAATC AGGTACAAAA ATATTTTCCT AAAGATAGAT TTTTGCCGCA ATTTAAGGTA
GATAGTTATG CCGGAATGTT ATTAACTAAT TCTCAGGGGA AACCTTTAGG AATTTTAGGG
GTTATGGGTC GTCAACCTAT GACCGATCTA AAATTTACAG AAGAAGTTTT ACGAATTTTT
GCCGTCCGAG CCGCCGCCGA ATTAGAACGT CAATATAATG AAAAAGCGCT GCGAGAATCA
GAACAATTTT ATCGACTGAT CTTAAGTAAT ATTTCTGATG CCGTTTTAAT TACGGATGAG
CAAGGAAATT TTACCTATAT TTGCCCCAAT ATTAAACATA TTTTTGGCTA TTCTTGCCAA
GAAATTGAAA ACATGAAAAG TATTGATCAA TTATTTGGGC AAAACTTATT TAAAATAACC
CAGTTAGAAG AATCGGGAGA AATTATCAAT ATTGAGCGAG AGATTTTGGA TAAATTGGGG
AACACTCATG TGATCTTAAT CAATATCAAA CAAATCTATA TCAAGGAAAA AAATTTTTTA
TTTACCTGTC GAGATATTAC TGAACGAAAA CAAGCAGAAG CCTCTTTAAG AGATAGTCAA
GTCAGACTAG CAAAAGCCCA ACAAATTGCT CATTTAGGTA ATTGCGACTG GAATCTTATC
ACTCATGAAT TTTATTGGTC AGAGGAAACT TATAGAATTT TTGGACTAGA ATCTCAAGAG
TTACACCTAA CAGAAAAAAC TTTTTTTGAC TGTCTCCATC CCAATGACCG AGAGTTCGTT
ATACAACAAT TTAAACAAGC CTTATCTAAT CGGGAATCTT ATAATATAAA TTATCGGATT
ATTCGACCAG ATCAAACAAT TCGTATTATT CAAAATCAAG GGAATATAAT CTTAGATAGC
CAAGGAAACC CGATTCAAAT GATTGGGACT ATTCAAGATA TTACCGAATC TAAATTAATG
GAGGATCATC TAAAAGAAAG TGAAGAAAAA CTTCGGCATA TTGTCACAAC TACAGCCGAT
GGGATAATTG TTATGAATCA TTCGGGTTAC ATTTATTTTG TTAATCCGGC GGCGGAATCA
TTCTTTGGCT TAAAAGCTGA TGAATTTTCG GGATATGAAT GGAACTTTTC GATTAATCAC
GACTCAACCG AGTTAGCGAT CGAACATCCT AATAATAAAT TACTCTTTTT AGAAGTAAAA
ATAGTAGAAA CTCTTTGGGA TGGAGAACCC GTTTATCTTA TTTCATTGAG AGATATTACC
CAAAGAAAAC AAGCAGAAGA AGCTCTAAAA GTGAGTGAAA AACGATATAG AGATTTAATC
AATAATTTAC ACGCAGGAGT GATCGTTTAT AGAGCAGATA AGAGTATTTT ACTCAGTAAT
CCAAAAGCGA ATGAATTGTT AGAAATTTCT TTAGAGCAAA TGTTAGGTAA AACTGCCATT
GACCCTGACT GGTATTTTTT ACGAGAAGAT GGCACAAAAA TGCCGGTGGA AGAGTATCCC
GTCAATATTG TTATCTCCAC TCGATATCCT TTAAAAAATT ATGTGGTTGG AGTTCATCGA
CCGAGGAGCA AAACTATTAT ATGGCTTTTA ATCAATGCCT TTGGCGAATT TAATTCCTGT
AAACAATTAA ATCAAGTTAT TGTCACGTTT GTCGATATTA CCGAATTTAA ACAAGCGCAA
GAAGCATTAC AAGACAGTAA GCGACGTTAC GTAACTTTAG CTCAAGCTTC CCCCGTTGGC
ATATTCCGCA CTGATATTCA AGGTAATTGT ATTTATGTCA ATCAAAGATG GCAAGCGATC
GCCGGACTAA CTTGGCAAAA AGCATTAGGA AAAGGGTGGT CACAAGCCAT ACATCCTCAA
GATCAAAACC GAGTTTTAGA GCAATGGGAA CAAGCCTTAG AAACTAACTC ACCCTTTCAA
GCTGAATACC GTTTTCAACG TCCTGATGGT ATAGTAACTT GGGTTTATGG TCAAGCAGTA
GCTGAAACCA ATGATCAGGG AAAATTAGAA GGATTTTTAG GCACAATTAC CGATATTAGT
GACCGCAAAC AAGCAGAAGT TAAACTGCAA AAACTCAACG ATGAATTAGA ACAGAAAGTC
GAAGTTCGTA CTCGTCACTT ACAACAAGCA AATCAACATT TAAGACAAGA AATATTAGAA
CGACAACAAG CAGAAGAAGC TCTACATAAA AGTGAGGCTC AGTTGCGTTC AATGTTTGAA
AATGCTGCTA TTGGGATCGC TTTTGTGGAT TTAGAAGGCA AGCCTTTTAA AAGTAATCCG
GCTCTAGAAA AATTTCTCGG TTATCGTTCC TCAGAATTAG CTCAGATGTC ATTCACTGAG
TTTACTTATC CGGAGGATAT CATGACCGAT TTACTCTTAT ATCAAGATCT TTTTACCAGT
AATAAAAATT CCTACCAGAT GGAAAAACGC TACATTCGCA AAGATGGACA AGGAGTTTGG
GGACATCTAA CCGTCTCTTT AGTTCGTAAT ACTCAGGGAA AACCTCAGTT TGCTATTGCA
ATGGTCGAGG ATATTAGTGA TGCTAAACAG AGCGAAATTG AGCGTATATT GGCACAAGAG
GCTTTAAAAG AAAATCAAAT CTTTTTACGC AATGTTATTG ATACTGTTCC TAATCTTATT
TTTGTTAAAA ATCGTCAAGG TCAATATACT TTAGCTAATC AAGCGATGGC CATGGCCTAC
GGAACGACAG TAGAAGAATT AGAAGGAAAA AGTGATGCTG ATTTTCATAT TATCCCCGCA
GAAGTGACTC AAGTTCAGAT TGATGAGGAG GAAGTGATGA ATTCTTTAGA ATCTTTATTA
ATTCCTGAAC AACCCCTAAC TTTAGCTAAT GGAGAAATTC GTTATTTTCA AACTATCAAG
ACTCCTCTCA TTTCTCCTGA TGGAAAAGCT CACTATATTT TAGGAGTTGC TACGGATATC
ACAGAACATA AACAAATTCA ACAAAAAATT GAAAAAGCCT TAATCAAAGA AAAAGAACTT
AATCAACTTA AAACTCAGTT TATTGATGTA GTTTCTCATG AATTTCGCAC TCCCCTAACT
TCTATCTTGG GTTATGCGGA GTTATTAGAA CGTCATAGTG ATAAGTTAAG TGAACAGAAA
AAAAATAACT ATCTTCATAA GATTAGAATA GCCGGACAAC GACTGAGTGA TTTAATCGAA
GATGTCCTCT GTATCAGCCG GGCTGAATCC GGTAAGCTGC AACTGAATCC TCACCCGCTC
AATTTAGAAG TTTTTTGTCA AGACTTAATC GAAGAAATTC AAATCGGAAT CGGGAAAAAT
CACGAAATGA TCTTTACTCG ACAACCCGAC TCGTTTAATA GCTTAAATGG GATCTTACTC
GATGAAAAAC TATTGCGTCA TATTTTATCT AACCTCCTCT CCAATGCCCT TAAATATTCT
TCTCTAGGCA GTCGGGTTGA ATTATCTTTA TACTATAAAA ATGAGCAGGT AATTTTTGAA
ATTTCAGATC AAGGAATCGG AATTCCTGCC GAAGCTCATC CTAAACTCTT TGATTCTTTT
TATAGAGCGA GTAATGTAGG TAATATTCCA GGGACAGGAT TAGGACTTCA TATTGTCTAC
AAATATGTCA CTTTACATGG AGGAACAATT GATTTTAGCA GTAAAATTTC AGTAGGGACT
ACTTTTAGGG TTAAAATACC CATAAGTGAA ACTCTATGTA AGCTCCCTTA A
|
|---|
| Protein sequence | MEQPEKATIL MVDDQPNNLK ILSDILHILD QTIIGVSSSQ EAIEYIDHQE FAVIILDVNM
PGMNGFQLAE YIRGQPRIQN TPIMFLTGTE MSDISYFQGY ELGAVDYLIK PIYPKIFRSK
VSVFVEIFRQ KQELKHKLEE IAQANQKLEN QIVKYKKAQS HLGYLAKNLE NLVEQRTLEL
QTTNFNLSDE IKQRQRMETV LRTMAVEFSK TSAEAFFQSL VQYLVKAEEI DYAFICELND
FYGDETQGKA FFTDGVSVQT IEYNLIDTPC LETLKSHFCI YPNQVQKYFP KDRFLPQFKV
DSYAGMLLTN SQGKPLGILG VMGRQPMTDL KFTEEVLRIF AVRAAAELER QYNEKALRES
EQFYRLILSN ISDAVLITDE QGNFTYICPN IKHIFGYSCQ EIENMKSIDQ LFGQNLFKIT
QLEESGEIIN IEREILDKLG NTHVILINIK QIYIKEKNFL FTCRDITERK QAEASLRDSQ
VRLAKAQQIA HLGNCDWNLI THEFYWSEET YRIFGLESQE LHLTEKTFFD CLHPNDREFV
IQQFKQALSN RESYNINYRI IRPDQTIRII QNQGNIILDS QGNPIQMIGT IQDITESKLM
EDHLKESEEK LRHIVTTTAD GIIVMNHSGY IYFVNPAAES FFGLKADEFS GYEWNFSINH
DSTELAIEHP NNKLLFLEVK IVETLWDGEP VYLISLRDIT QRKQAEEALK VSEKRYRDLI
NNLHAGVIVY RADKSILLSN PKANELLEIS LEQMLGKTAI DPDWYFLRED GTKMPVEEYP
VNIVISTRYP LKNYVVGVHR PRSKTIIWLL INAFGEFNSC KQLNQVIVTF VDITEFKQAQ
EALQDSKRRY VTLAQASPVG IFRTDIQGNC IYVNQRWQAI AGLTWQKALG KGWSQAIHPQ
DQNRVLEQWE QALETNSPFQ AEYRFQRPDG IVTWVYGQAV AETNDQGKLE GFLGTITDIS
DRKQAEVKLQ KLNDELEQKV EVRTRHLQQA NQHLRQEILE RQQAEEALHK SEAQLRSMFE
NAAIGIAFVD LEGKPFKSNP ALEKFLGYRS SELAQMSFTE FTYPEDIMTD LLLYQDLFTS
NKNSYQMEKR YIRKDGQGVW GHLTVSLVRN TQGKPQFAIA MVEDISDAKQ SEIERILAQE
ALKENQIFLR NVIDTVPNLI FVKNRQGQYT LANQAMAMAY GTTVEELEGK SDADFHIIPA
EVTQVQIDEE EVMNSLESLL IPEQPLTLAN GEIRYFQTIK TPLISPDGKA HYILGVATDI
TEHKQIQQKI EKALIKEKEL NQLKTQFIDV VSHEFRTPLT SILGYAELLE RHSDKLSEQK
KNNYLHKIRI AGQRLSDLIE DVLCISRAES GKLQLNPHPL NLEVFCQDLI EEIQIGIGKN
HEMIFTRQPD SFNSLNGILL DEKLLRHILS NLLSNALKYS SLGSRVELSL YYKNEQVIFE
ISDQGIGIPA EAHPKLFDSF YRASNVGNIP GTGLGLHIVY KYVTLHGGTI DFSSKISVGT
TFRVKIPISE TLCKLP
|
|---|
| |