| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2000 |
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| Symbol | |
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| ID | 7109468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 2255950 |
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| End bp | 2257314 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643480258 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002377298 |
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| Protein GI | 218438969 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0865474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAGCC AAATTGACCT AGAGCAAATC AGTAAAATCC TCGAAATTTC CCCAGGTAAT
TTCCCCGTAA TTATCTCTAA AAAACCGATT ACGGGAATCA GTACAGATAG CCGTTATATT
AAGCCTGGCG AAATTTTTGT CGCTTTACGG GGGGATAAAT TTGATGGCCA TGAATTTGCT
GAGGTTGCTG TAGAAAAGGG CGCGACTGCT TTAATTTTAG ACAAAAAACT GTCAGTATTA
TCTACTAATG AAATACCACA ATTCATCGTC AATAATACTT TAAAAGCTTA TCAACAAATT
GCTCAATGGT GGCGCAATCA ATTCCAAATT CCTATTATTG CTGTAACCGG TTCAGTCGGT
AAAACTACCA CTAAAGAATT AATTGCTGCT GTATTATCAA CCGCCGGAAA AGTTCATAAA
AGTATAGGCA ATTATAATAA TGAAATAGGC GTTCCTAAAA CTTTACTTGA ACTCGATCAT
ACTCATCATT ATGGTGTGAT TGAAATGGCG ATGAGAGCAA AAGGAGAAAT CTCCCTATTA
ACGGAAATTA CTCGTCCTAC AATCGGTGTC ATTACTAATG TAGGAACTGC TCACATCGGA
CGATTAGGCT CTCAAGAAGC TATTGCCGAA GCTAAATGTG AGCTACTCGC CCAAATGTCT
CAGGATAGCA TAGCAATTCT CAACCATGAT AATTCTTTGT TATTAGAAAC CGCATCTACC
TTTTGGCAGG GAAAAACGAT AACTTATGGT TTAGAAGGAG GAGATCTGAG CGGACAACTG
ATTAACCCTC AAACCTTGAG AGTCGAAGGC AAAGAGTTTC CCTTACCTTT ACCGGGACGA
CATAATGCGC TCAATTATCT GGCGGCTTTA GCCGTAGCTA AAGTGCTTGA TTTAGATTGG
ACACCTTTAA CTGAAGGCTT GACCGTAAAT TTACCTAGTG GCCGTTCTCG TCGTCATCAA
CTCCCCAATA ATATCCTGAT TCTAGATGAA ACCTACAATG CGGGACTAGA ATCGATGCTG
GCCGCCCTAC AATTACTTAA AGAAACTCCG GGTAAACGTC ATATTGCTGT CTTGGGAACG
ATGAAGGAAC TCGGAGAGCG ATCGCCCCAA TTTCATCATC AAGTCGGAAA AGCGGTAAAA
GACTTGGGAA TTGACCATTT AGTGGTATTA GTTAATGATC CGCAAGCTGA ACATATTGCT
GCGGGGGCTG ATGGGGTAGC GACAAGCTGT TTTAAAACCC ATCAAGAAGT GGTTAACTAT
TTACAAGGGT TGATTAAGAG TGGCGATCGG ATTTTATTTA AAGCCTCGAA TTCTGTCGAA
TTAAATCGAG TTGTCAATGA TTTGATCAAC TCCCAAGAAA TTTAA
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| Protein sequence | MLSQIDLEQI SKILEISPGN FPVIISKKPI TGISTDSRYI KPGEIFVALR GDKFDGHEFA
EVAVEKGATA LILDKKLSVL STNEIPQFIV NNTLKAYQQI AQWWRNQFQI PIIAVTGSVG
KTTTKELIAA VLSTAGKVHK SIGNYNNEIG VPKTLLELDH THHYGVIEMA MRAKGEISLL
TEITRPTIGV ITNVGTAHIG RLGSQEAIAE AKCELLAQMS QDSIAILNHD NSLLLETAST
FWQGKTITYG LEGGDLSGQL INPQTLRVEG KEFPLPLPGR HNALNYLAAL AVAKVLDLDW
TPLTEGLTVN LPSGRSRRHQ LPNNILILDE TYNAGLESML AALQLLKETP GKRHIAVLGT
MKELGERSPQ FHHQVGKAVK DLGIDHLVVL VNDPQAEHIA AGADGVATSC FKTHQEVVNY
LQGLIKSGDR ILFKASNSVE LNRVVNDLIN SQEI
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