Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1976 |
Symbol | |
ID | 7109444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 2223937 |
End bp | 2228088 |
Gene Length | 4152 bp |
Protein Length | 1383 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643480234 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002377274 |
Protein GI | 218438945 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.624185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTCA ATCAAACTGA CTTCGACGAT ATATTTACCT ATAGCGGGGA AATGGGAGAA CTGATCAAGA CGTTTAATTG GTCAACCACT TCTTTAGGCC CGATTTCCCA ATGGCCGCCA AGTTTGAAAA CCGCAGTCAG TATTATGTTA GCGTCTAGAT TCCCCATTCA GATTTTATGG GGGTCTGATT ACATACAATT TTATAATGAT GCTTATTGCC CCATTTTAGG CAGTAAACAC CCAAAAGGAT TAGGTCAGCG CGGTCAAGAG TGTTGGGCAG AGGTTTGGGA CTTTGCTGGT TCTCGTTTAG ACCAGGTGAG ATTGACTGGT GAGGCCAGTT GGTCAGACGA TCAATTATTG CTCTTAGACC GTCACGGATA TACCGAAGAA TGTTACTTTA CCTTTTCTTA TACCCCCGTC AGAGATGAAT CCGGTCAAGT AGCGGGCATT TTTAACGCCG TTAATGAAAC CACTCAGCGA GTCATCGATC AACGTCGTCA ACACACTCTA TCCCTGTTGG CCACTCATGT CACTCAAGCT AAAACTTATC AAGAAGCCTG TACGATCGCC ACTAATATCC TAGCTTCCAA TCCGGAAGAT GTTCCCTTTG CTTTATTATA TGAGTTAGAG ATTAACACCG GTTATGCTAA ATTAATCAGT CAGGTTGGAT ATGGGGAAAA TTTAGCCTCT GATCCCTTTC TTTTCGACAT TAATCTCGAT CATCCACCCT CCGAAGTCAA ATCCTTGGTT AAAGTGGGGC TAACGGGACA ACAGGACTTA ATCGATAATT TAAAAACTCA CTGGTCTAAT TTACCGACTG AACCTTGGGG AGAAGCGCCT AATTGTGCCC TCGTCCTGCC GATTATTTTA CCCGGACAAG ATAGGCCGGT TGGGATATTT GTGGCCGGAA TTAGCCCAAG ACGAGCATTA GATTCCCATT ATCATCAATT TTTTGAGCTA ATGGTCAATC ATATTTCCTT GGCGATCGCT AATGCTTATG CCTATGAAGA AGAACGCAAG CGGGCTGAAG CCTTAACGGA ACTCGATCGG GCCAAAACCG TATTTTTTAG TAATATTAGT CATGAATTGC GAACGCCTCT GACCTTGATT CTAGGGCCAA TCGAAGCACT GTTACACTCT GATGAGTCAT CCCTATCCAA AGGCGATCGC ATCTCCTTAA TCATGGCTCA ACGGAATGTA TTACGCTTAC AAAAATTAGT CAATACCCTG TTAGAATTTT CTCGCTTAGA AGCCGGACGA ATACAAGCCT TTTATCAACC GACGGATTTA GCCACATTTA CTCATGATCT AGCGAGTGTT TTTCGGTCGG CCATGGAACA AGCCGGGATT GAGTTTTCCG TCAATTGCCC CCCGTTGCCC GAATTGATCT ATGTTGATCG TCAAATGTGG GAAAAAATCG TGCTTAATTT ACTGTCTAAT GCCTTTAAAT TTACTTTTGA AGGAGAAATC AGGTTATCTT TAGCATGGAC AGGAGAACGG GTAAAATTAG ACATTCAAGA TACTGGGGTT GGCATTGCTC CCGAAGAAAT CCCCCATCTG TTTCAAAGAT TTCATCGAGT TCTCGGAGTT CGTAGCCGGA CTCATGAAGG TTCAGGGATT GGGTTATCCT TGGTTCGAGA GTTAGTCAAT CTTCATGGCG GCACAATTGA GGTTAACAGC ACTCTTGAGG CAGGAACTTG TTTTACTATC TATATTCCGA GCGGAACTGC CCACCTCAAC CCCGACCAAA TTAGCTCAAC CCCTTCTTTA CCCGCCACTT CTCCCACAAC GGCGGTTTTT GTGGAAGAAG CCCTAGGATG GCTTCCAGAA ACAGCAGAAA GCTTGGCCAC TGACACCCCG TCCTCCCATC GTCTTACCCC AGCAAATGGC CGCATTTTAC TCGCCGATGA TAATGGGGAT ATGCGGGAAT ATGTCAAGCG GTTATTAAGT CAATATTATG AAGTCGAAAC TGTTGCCGAT GGGATAGCCG CCCTAGAAGC GATTCGTCGT CATCCCCCAG ATTTAGTCTT AAGTGATGTG ATGATGCCTC GCCTCAATGG CTTTGAGTTA CTCCAAGAAT TACGCCGTAA TCCTTTAACT GAAGAATTGC CCATCATTCT CTTATCTGCC AGAGCCGGTG AAGAATCTTT AGTCGAAGGA CTTAAAAGCG GAGCGGATGA TTATTTAGTC AAACCCTTTT CGGCACGAGA ACTTTTAGCC CGCATTGAAG CCACCTTAAA AATGGCGCAA CTCCGCCAAC AAGCCGCTCA AAAAGAGCAA AAACTACGGG CAGAAGCAGA AGCCGCCCGA CAACAAATTA CCAATATTTT TGAAAGTATT ACTGATGGTT TTGTGGCTTT TGATCATCAA TGGCGGTTTA CTTATGTTAA TCAACAGGCC GCCCAAATGC TCAATCAATC TAGAGAAGAT TTGCTAGGAA ATCAAATTTG GGAGTTATTT CCGGAAACTA TTGGACAAGA GTGTTATCAA CAATTGCATC AAGCGTTTAA TGAACAAATT ACTTTAACTT TTGAAGAGTT TTCTCCCGTT TTTGGTCGTT GGTTTCACCT TCGGGTTTAT CCTTCTTCTG AAGGATTGTC TGTCTATTTT CGAGATATTA CTAAAGCTAA AGAAAATGAC CTATTACGGC AAAAAAACGA GGAACGATTA CGCCAAAGTG AAGAACGATT AAATATTGCT CTCTCTAGTG CCCCTATTTC CTTATTCCAT CAAAATCAAG AGTTAGAATA TACTTGGATT TATAACTCTG CTTTTGGATA TCAAATTAAT GATGTAATCG GAAAAACCGA TGAGGAGTTA TTGGGGGCTG AACAGGCACA GATTTTAACA GAGATTAAAT CAGGAGTTCT TCAGAGCGGA ATTGGACGAC GCACAGAAAT TAAAATCACT GTCTTAGAAG AAGATAAATA TTTTGATTTA ACCGTTGAAC CGTTACGAAA TTTAGAGGGT AATATTATCG GCATAACGGC GGCTTCAGTC GATATTACAG AGTTAAAAAC GGCTGAACAA GCTTTACGAG AAAGTGAATC TCGATTTCGG GTGATGGCAG ATAGTGCCCC CGTTTTAATC TGGATGTCAG GCACAGATGG CTTATGTAAT TGGTTTAATC AAAATTGGTT AGAATTTACG GGACGAACTC TAGAACAAGA ACTAGGAAAT GGGTGGGCGC AAGGGGTTCA TTCTGATGAT TATAATTTTT GTTTAGAAAC TTATTTATCC GCTTTTGATC AACGGATAGG CTTTCAAATG GAGTATCGTC TGAGACGGGC TGATGGGGAG TATCGTTGGG TTTTAGATAA CGGTAAACCT CTCTTTACTC CTGAAGGAAT TTTTAGCGGT TATATCGGCT CTTGTGTTGA GATTACTGAA CAAAAAGAAG CTAATTTGAT CTTAGAAGAA AAAGCTCAGG AATTAGCTCA ATTAAATACA ACTTTAACGG AAACCGCCGA ACTCTTACAA AAGAAAAATG AAGAACTCGA TCAATTTACC TATATTGTTT CCCACGATCT TAAAGCCCCT CTCAGAGCGA TCGCTAATCT TTCTCAATGG ATCGAAGAAG ATTTAAGTGA TATAATTCCG CCAGAAAGTC AACAACAAAT AGAGCTATTA CGGCAACGAG TTTATCGGAT GGATCAGTTA ATTAATAATT TATTAGACTA TGCTCGAATT GGGCGGAGTG AAGCCACAAA AGAAAGGGTA GAAGTGGCTC AATTACTCGA AGAAATTATT GATTCTCTTG CTCCCCCTCC TACTTTTACT CTAGAAATTG ATTTACCTAT GCCAACCTTA ATGACAGAAA AATTACTTTT AAGTCAGGTT TTTTCTAATT TAATTAGTAA TGGGATTAAA CATCATGGTA AAGACCAGGG TAAACTTAAA ATATCAGTTC AAGAGCAAAA CAATTTTTAT CAATTTTTAA TTGCCGATGA TGGTCAAGGA ATTCCAGTAG ACTATCAAGA GAAAATTTTT GCTATTTTTC AAACCGTAAA AAGTAAAGAT AACAAAGACA GTACCGGCAT TGGTTTATCA ATTGTTAAAA AAATTGTGGA AATTCAAGGA GGAAAGATTA TGGTCTCTTC ACAAGTGGGA GAAGGAACAA CCTTTAGCTT TACTTGGCCA AAAAATTCCT AA
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Protein sequence | MTVNQTDFDD IFTYSGEMGE LIKTFNWSTT SLGPISQWPP SLKTAVSIML ASRFPIQILW GSDYIQFYND AYCPILGSKH PKGLGQRGQE CWAEVWDFAG SRLDQVRLTG EASWSDDQLL LLDRHGYTEE CYFTFSYTPV RDESGQVAGI FNAVNETTQR VIDQRRQHTL SLLATHVTQA KTYQEACTIA TNILASNPED VPFALLYELE INTGYAKLIS QVGYGENLAS DPFLFDINLD HPPSEVKSLV KVGLTGQQDL IDNLKTHWSN LPTEPWGEAP NCALVLPIIL PGQDRPVGIF VAGISPRRAL DSHYHQFFEL MVNHISLAIA NAYAYEEERK RAEALTELDR AKTVFFSNIS HELRTPLTLI LGPIEALLHS DESSLSKGDR ISLIMAQRNV LRLQKLVNTL LEFSRLEAGR IQAFYQPTDL ATFTHDLASV FRSAMEQAGI EFSVNCPPLP ELIYVDRQMW EKIVLNLLSN AFKFTFEGEI RLSLAWTGER VKLDIQDTGV GIAPEEIPHL FQRFHRVLGV RSRTHEGSGI GLSLVRELVN LHGGTIEVNS TLEAGTCFTI YIPSGTAHLN PDQISSTPSL PATSPTTAVF VEEALGWLPE TAESLATDTP SSHRLTPANG RILLADDNGD MREYVKRLLS QYYEVETVAD GIAALEAIRR HPPDLVLSDV MMPRLNGFEL LQELRRNPLT EELPIILLSA RAGEESLVEG LKSGADDYLV KPFSARELLA RIEATLKMAQ LRQQAAQKEQ KLRAEAEAAR QQITNIFESI TDGFVAFDHQ WRFTYVNQQA AQMLNQSRED LLGNQIWELF PETIGQECYQ QLHQAFNEQI TLTFEEFSPV FGRWFHLRVY PSSEGLSVYF RDITKAKEND LLRQKNEERL RQSEERLNIA LSSAPISLFH QNQELEYTWI YNSAFGYQIN DVIGKTDEEL LGAEQAQILT EIKSGVLQSG IGRRTEIKIT VLEEDKYFDL TVEPLRNLEG NIIGITAASV DITELKTAEQ ALRESESRFR VMADSAPVLI WMSGTDGLCN WFNQNWLEFT GRTLEQELGN GWAQGVHSDD YNFCLETYLS AFDQRIGFQM EYRLRRADGE YRWVLDNGKP LFTPEGIFSG YIGSCVEITE QKEANLILEE KAQELAQLNT TLTETAELLQ KKNEELDQFT YIVSHDLKAP LRAIANLSQW IEEDLSDIIP PESQQQIELL RQRVYRMDQL INNLLDYARI GRSEATKERV EVAQLLEEII DSLAPPPTFT LEIDLPMPTL MTEKLLLSQV FSNLISNGIK HHGKDQGKLK ISVQEQNNFY QFLIADDGQG IPVDYQEKIF AIFQTVKSKD NKDSTGIGLS IVKKIVEIQG GKIMVSSQVG EGTTFSFTWP KNS
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