| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1884 |
|---|
| Symbol | |
|---|
| ID | 7109885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 2111367 |
|---|
| End bp | 2111687 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643480144 |
|---|
| Product | pentapeptide repeat protein |
|---|
| Protein accession | YP_002377184 |
|---|
| Protein GI | 218438855 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.000000561383 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCG CAGAACTTTT AAGTCGTTAC AGCGCAGGGC AAAGAGATTT TAGTAACTTG
CAATTAATAG CAGTTAATCT CAAAAATGTA AATCTTAGTG GGGTAAACTT CAGTGGGAGT
GATCTTCGGG GAGCTAACCT GAGTCGATGT AATTTAACAG GGGCTAATCT TAGTGGGGTT
ATGTTGACAG GGGCTAATTT AACTGAGACT AATTTAATGT ATGCTCATCT TAATGATGTG
GATCTTACTA ATGTTAATCT GAGTCATGCT TACTTAGATA AAGCGATTAT GCCTCATGAA
AAAAGCTTGA TTTCTCAATA A
|
|---|
| Protein sequence | MNRAELLSRY SAGQRDFSNL QLIAVNLKNV NLSGVNFSGS DLRGANLSRC NLTGANLSGV
MLTGANLTET NLMYAHLNDV DLTNVNLSHA YLDKAIMPHE KSLISQ
|
|---|
| |