| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1579 |
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| Symbol | |
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| ID | 7109579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1741006 |
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| End bp | 1742637 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643479845 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002376886 |
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| Protein GI | 218438557 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.125982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATG TAAAAAATTT GTGGTATAAA AACGCTATTA TTTATTCTCT TGATGTAGAA
ACGTTTAAGG ATTCTAATGG GGATGGAATA GGAGATTTTC CCGGTTTAAC CAGTTCTTTG
ACTTATCTTT CGGGTTTAGG AATTGATTGT CTGTGGTTGT TGCCGTTTTA TCCTTCTCCG
AATTGTGATG ATGGCTATGA TATTACGGAT TATTATAGTG TTGACCCTCG CTTAGGAAGT
TTGGGAGATT TTGTTGAGTT TATGCACCGA GCAAGGGAAT TAGGAATTAG AGTAATTATA
GATTTAGTGG TTAATCATAC CTCGATTCAG CATCCCTGGT TTCAAGAAGC TCGCTCAGAC
AAAAATTCTA ATTATCGACC CTATTATGTT TGGTCAGAAA ATCCCTCAGA ATCTCATCCT
GATTTAATCG CTTTTCCGAC AGTAGAAGAT AGTGTTTGGG AATATGATGA AAAAGCAGAA
GCTTACTATC TCCATCACTT TTATAAACAT CAGCCAGATT TAAACATAGG AAATCCGGCA
GTACGAGAGG AAATTCTCAA AATTATGGGG TTTTGGTTGG AATTAGGAAT AGCTGGTTTT
CGCATTGATG CTGCTCCTTT TTTAATTCAA GGAACTGGAT TAGAAAATGT TACCCCCGAA
AAGTTACAGG GTTTTCTTCA AGAAATGCGG GAGTTTATGT TATCTCGTCG AACAGATGCA
ATCCTTTTAG CTGAGGCAAA TGTTGAGCCA GAAAAAATCC CGCTTTATTT TGGGAAAGGG
GAGAGAATGC ACCTGTTATT TAATTTTATT CTCAATCAGT ATATGTTTTT GGCGTTGGCT
CGGCAAGATA AAACCGTTTT GGAAGAAGGG TTAAAATTGC TGCCGGAAAT TCCCTCGACT
TGTCAATGGC TTAATTTTGT GCGTCATCAT GATGAGCTTA CCCTTGATTT TCTCAGTGGT
TCTCAACAAG AAGAAATTTT TGCCGCCTTT GCTCCCGAAG AAAATATGCA GATTTTTGGG
CGGGGTGTGC GTCGGCGACT CGCTCCGATG ATGAATAACG ATCGCCGTCG GATAGAATTA
ATTTATAGTT TGCTGTTTAC GTTACCGGGG ACTCCTTTAC TTCGGTATGG TGCAGAGATT
GGCATGGGAG ACGATTTATG CTTGCATGGA CGAACTAGCG TAAGAACAGC AATGCAATGG
ACAGATGAGT TTAATGGGGG TTTTTCAACG GCTAACCCTG ACGAGCTTAC TCGACCAATT
ATATCAGACG ATGAGTATGG ATATAAAAAG GTTAACGTAG CTTTTCAAGA AAGAGATCCT
TCTTCTTTAC TCAACTGGTT TGAGCATTTG ATTCGTACCC GTCAGCAATG TCCGGAATTT
GGGCGAGGAA CTTGGGAAAT TTTAGAAACG GGTAAATCTT GCACCTTTGC TCATTGTTGT
CATTGGGAAG GGGCAACGGT TCTTGCTATT CATAATTTTA GCGATCGCCC TTGTCATGTT
AATATCCCTC TATGTAAAGG TAAGCATTTA TGGGATTTAT TTGGGGATCA TCAATATGAA
CCTTCTGATC ATTCGGGAGA ACTTTGTGTC AATGGTTATG GGTATCGCTG GTTTCGAGTG
GATGAGAGAT AA
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| Protein sequence | MKYVKNLWYK NAIIYSLDVE TFKDSNGDGI GDFPGLTSSL TYLSGLGIDC LWLLPFYPSP
NCDDGYDITD YYSVDPRLGS LGDFVEFMHR ARELGIRVII DLVVNHTSIQ HPWFQEARSD
KNSNYRPYYV WSENPSESHP DLIAFPTVED SVWEYDEKAE AYYLHHFYKH QPDLNIGNPA
VREEILKIMG FWLELGIAGF RIDAAPFLIQ GTGLENVTPE KLQGFLQEMR EFMLSRRTDA
ILLAEANVEP EKIPLYFGKG ERMHLLFNFI LNQYMFLALA RQDKTVLEEG LKLLPEIPST
CQWLNFVRHH DELTLDFLSG SQQEEIFAAF APEENMQIFG RGVRRRLAPM MNNDRRRIEL
IYSLLFTLPG TPLLRYGAEI GMGDDLCLHG RTSVRTAMQW TDEFNGGFST ANPDELTRPI
ISDDEYGYKK VNVAFQERDP SSLLNWFEHL IRTRQQCPEF GRGTWEILET GKSCTFAHCC
HWEGATVLAI HNFSDRPCHV NIPLCKGKHL WDLFGDHQYE PSDHSGELCV NGYGYRWFRV
DER
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