| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1532 |
|---|
| Symbol | |
|---|
| ID | 7110589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 1690187 |
|---|
| End bp | 1691101 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643479796 |
|---|
| Product | histone deacetylase superfamily |
|---|
| Protein accession | YP_002376840 |
|---|
| Protein GI | 218438511 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTAC CCATCGTCTA CCATCGTGAT TATGTTACCC CCTTACCTGA TGGTCATCGC
TTCCCGATGC CAAAATTTAA GCTTCTCTAC GACTTATTAA TTACTGATGG AATCACTACC
CCTGAATCTA CCCATACCCC AGAAGTCCCC ACACAAGAGA TCATTCAATT AGTCCACACT
CCGGACTATG TTGGGGCTTA TTGTAGCGGA ACTCTCGATC CTAAAGCACA GCGTCGTATT
GGTTTACCTT GGAGTCCGGG TTTAGTGACT CGTACCTGTA CCGCCCTTGG GGGAACGATT
CTCACCGCTA AATTAGCCCT AAAACAGGGG ATTGCTTGTA ATACCGCCGG TGGAACTCAT
CACGCTTTCC CAAGTTATGG ATCTGGATTT TGTATTTTTA ATGATTTAGC GATCGCTACC
CGGACTTTAC AACATTTGGG TCTGGTTAAG AAAGTCTTGA TTGTTGATTT AGATGTGCAT
CAAGGAGATG GAACGGCTTA TATTTTCCAA AATGATGAGA GTGTATTCAC GTTTTCGATG
CACTGTGAGG CGAATTTTCC GGGAACTAAA CAAAAAAGCG ATCTCGATGT TCCTTTGCCT
GTTGGGTTAG AGGATGAGGG TTACTTAAAA ATTTTATCCC AGTATTTAAG CGATCTTCTC
TGCCAGTTTA ACCCCGATTT AGTTTTGTAT GATGCCGGTG TAGATACCCA TATTAGCGAT
CGCTTAGGTA AACTGGCTAT GACTAATATC GGGATTTACC GCCGAGACTT TTACGTTTTG
AGTACCTGTC TAGCGGCGGG ATATCCAGTC GCCGGCGTGA TAGGAGGGGG TTATGCTAAA
GATCTACAAA ATTTAGTCTA TCGTCATTCT CTCTTACATC GGGCGGCTAG AGATGTGTAT
CGTCAATTTC TCTGA
|
|---|
| Protein sequence | MSLPIVYHRD YVTPLPDGHR FPMPKFKLLY DLLITDGITT PESTHTPEVP TQEIIQLVHT
PDYVGAYCSG TLDPKAQRRI GLPWSPGLVT RTCTALGGTI LTAKLALKQG IACNTAGGTH
HAFPSYGSGF CIFNDLAIAT RTLQHLGLVK KVLIVDLDVH QGDGTAYIFQ NDESVFTFSM
HCEANFPGTK QKSDLDVPLP VGLEDEGYLK ILSQYLSDLL CQFNPDLVLY DAGVDTHISD
RLGKLAMTNI GIYRRDFYVL STCLAAGYPV AGVIGGGYAK DLQNLVYRHS LLHRAARDVY
RQFL
|
|---|
| |