Gene PCC7424_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1480 
Symbol 
ID7108417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1629623 
End bp1630507 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content42% 
IMG OID643479745 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002376789 
Protein GI218438460 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000191498 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAAAT TTGAAAGTCT AAGAGCATTT ACAGAAGTCA TCAAGGGGGG AGGGTTTGCC 
GCAGCCGCGC GACAGATGAA TTTATCTCGC TCAATGGTGA GTAAGTTGGT GATGAATTTA
GAAAATGACT TAGGAGTACA ATTACTGCTC CGCACTACCC GGCGCGTCAC TCCTACCCCT
ACCGGTTCGG CGTTTTATGA GCGTTGCGTG ACTATTTTGG CGGAGTTGGA AGAGGCTCAA
TTAGCGGTTT CTCAACTTCA CACAGAACCT AAAGGTCTTC TTAAAGTTAA TGCGCCGATG
TCTTTTGGGA CTTTACATTT AGCACCGGCG ATCGCGGATT TTATGTTAAG ATATCCTGAT
TTACAAGTAC AATTAACCTT AGAAGATCGC TTTATTGATC CGGTTGCTGA AGGGTTTGAT
GTGACGGTTA GAATCTGTAA ACCGTTTAAG GCAGCAGGGT TAATTGTTCA TCCTTTAATG
AAGGTTAAAC AGGTTCTTTG TGCTGCCCCC AGTTATTTAA AAAAAAGGGG AACTCCTACC
CATCCCCACC ATTTACGGGA GCATTCTTGT TTACATTATG GTTATTTTTC TACTGGCAAT
CAATGGACGT TATCGGGGGC GGAGGGAGAC TATACAATTG CTATTAGTGG GGCGTTAAGT
TCTAATAATG GTGAGGCTCT TAAATGGGCA GGAATTAAGG GTTTAGGTGT TGTTTTTTTG
CCGACTTTTA TTGTTGGGGA TGAGTTAAAA CAAGGGTCTT TGGTAGAGGT TTTATCGGAT
TATTCTGTAG GAGAACTTTC TGTTTATGTG GTTTATCCGA CTAATCGTCA TCTTTCTCTT
AAAATTCAGT TGTTGACTGA GTTTTTAAGG GGGGTTTTTG CGTAG
 
Protein sequence
MDKFESLRAF TEVIKGGGFA AAARQMNLSR SMVSKLVMNL ENDLGVQLLL RTTRRVTPTP 
TGSAFYERCV TILAELEEAQ LAVSQLHTEP KGLLKVNAPM SFGTLHLAPA IADFMLRYPD
LQVQLTLEDR FIDPVAEGFD VTVRICKPFK AAGLIVHPLM KVKQVLCAAP SYLKKRGTPT
HPHHLREHSC LHYGYFSTGN QWTLSGAEGD YTIAISGALS SNNGEALKWA GIKGLGVVFL
PTFIVGDELK QGSLVEVLSD YSVGELSVYV VYPTNRHLSL KIQLLTEFLR GVFA