Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1479 |
Symbol | |
ID | 7108416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1628608 |
End bp | 1629495 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643479744 |
Product | pentapeptide repeat protein |
Protein accession | YP_002376788 |
Protein GI | 218438459 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.000330683 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTATCTG GTTCTTCAGC AATAAATAGA TATCTATTTG ATTTTTTAAA AGATGAAATT CGTTTACAAG ATTTAGAAAT AGTGAAAAAA TGGCAACACA TATTATGTGA ATTGATAGAG TGTATGTTAA ATCAGGGAAT GCCAATGGAA AAATTAGACC CTCGTCCTAG TTTTCAAGAA GAAATGCGAC AAGCGAGGAA TGCAGAGGAA GCATTATTAG TGGTGTTAAA TGCCTGTGCA AGAGTGACCC AAGAATTATC TAATATTAAT TGGCCTTCTC CTGATGCTTT TGTTGAATGG ATTTCGAGGT TACAATTAAA AAATAAAATG GGAGTAAAAG AAGATAGAGT AACTTTTGAC TGTTTGAGTT TTTTAAATTT TAAAAATTGT ATTTTTATAA ATCTTAACCT TGAGGGAGCA AATTTAATAG GAGCAAATTT TGCAAATACT TATATTATAG GAGTAAAATT GAATTTTGCC AATATGGAAA ATGTAAATTT TGAAAACTCA CAAATTATAT CTACAGAATT TAAAAAGACA AATTTACTCA ACGCAAATTT TACAAAAGTT CATTGTCTAA AATCTTTCGT TGGCTCTAAT CTTACTCATC AATTCATCGA AGTTTATCCT TATTTTGAAA AAGCAAATCT TACCAAAGCT AATTTTGAGC GTGCAACTTT ATGGGGAATT CTTTTTATAG AATCAGATTT AACTGAAGCT AATTTTACCA ATTGTGATAT TAGAGAAGTT AATTTTGAAG GTTCAAATTT AAACAGAGCT AATTTTACCA ATAGTATTAT TGATCAAAAA ACAGTAACTT TTAAGGAAGC AGATATTAAA GATGTAAATT TTACAAACAT AAATACTTTT GATGAAAGTT CCGAATAA
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Protein sequence | MLSGSSAINR YLFDFLKDEI RLQDLEIVKK WQHILCELIE CMLNQGMPME KLDPRPSFQE EMRQARNAEE ALLVVLNACA RVTQELSNIN WPSPDAFVEW ISRLQLKNKM GVKEDRVTFD CLSFLNFKNC IFINLNLEGA NLIGANFANT YIIGVKLNFA NMENVNFENS QIISTEFKKT NLLNANFTKV HCLKSFVGSN LTHQFIEVYP YFEKANLTKA NFERATLWGI LFIESDLTEA NFTNCDIREV NFEGSNLNRA NFTNSIIDQK TVTFKEADIK DVNFTNINTF DESSE
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