Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1458 |
Symbol | |
ID | 7108395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1603779 |
End bp | 1605536 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643479724 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_002376768 |
Protein GI | 218438439 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAG AGCAAATATC TGTTTTTGAC CCACAGAAGC AAACTGTACA ATCTTCCTGG TCAGGACGGA GTGAAATTCT TTTAACACAA CAAAATAAAA TTCTAAAAAT GATAGCCACT GGTCAACCTC TTTTAGAGAT ACTTGACCAA ATAATTAACT TCATGGAAAA AGAATCAGGA AATGCCCTCT GTTCAGTGCT GTTACTCGAA AAAGATGGGA GTAAACTGCG TTGGGGGTCT GCGCCAAGTC TTCCCGAAGA GTATAACAGA GATGTAGATG GTCTTCTCGT TGGCCCTTGT AATGGGTCTT GCGGAACGGC AGTACATCGA GGAGAAATGG TTATGGTTAG CGATATTGCT AATGACCCCC TTTGGCATTC TGCCCGAACT TTAGCGTTAA ATCATGGTCT AAAAGCCTGT ACTTCTGTGC CTATTTTTAA TAGTAAAAAA GAGGTAGTAG GAACATTCGC TTTTTATTAT CGACAGTCTC AACATCCGAC TCAATATGAC TTTCAATTAA TAGAAGTCGC CCAAAGTTTA GCCGGAATTG CCATTGAACG GCAGTTAATG GATGAAGAAA GAAATCAACT TCTCAAGAAT GAACATTCAG CCCGTTTAGA AGCCGAACAA CTCAATCAAA TTAAAGATGA GTTTTTGATG ATGCTTTCTC ATGAGCTTCG TACTCCTCTG ACTGCTATTT TAGGATGGTC ACAATTATTA AAAAAAGGAT TAATTACTCA AAAAAATAAG GTTGATAAAG CCTTAGAAAC GATTGAACGC AATGCTAAAT TAGAATCTAA ATTAGTTGAC GATTTATTAG ATGTTTCTCG AATTTTAGCA AATAAATTAA TTTTAAAAAA AGAACCAATC GATTTAGAAT TTATTATTAA ACTAACCCTA GATTCAATTT TATTAACAGC CCAAGCCAAA GAGATTACTA TAAAAACCTT GATTCAATCA CCCAACTTAA AAGTATGGGG AGACAAACAA AGATTACAAC AAGTTTTTTG GCATCTTCTT TCTAATGCTA TTAAATTTAC GGGAGAAGGA GGAGTAATTA CTATCACTCT CACCCAAGAC AATGAGCGAG CAAAAATTAT AATTCATGAT ACAGGACAAG GTATTAAACC AGAGTTATTA CCTTTTGTTT TTAAACGGTT TTGGCAGGCC GATAGTTCAA GTCAAAGGAT AGCAGGAGGG TTAGGAATAG GGTTATCTAT AGCTCATCGT TTAGTAGAAT TACATAACGG TCAAATTCAG GCTGAAAGTT TAGGAGAAGA AAAAGGGGCA ACATTTACGG TAATTCTTCC CTTACAACAC TCTGAAAACC CGGCTCATCT CGGTTTAAAT AATTCTGATA AAATTAAGCC TCCCCAAAAC CCCTTGAAAG GCTATCGAAT TTTAATTGTC GATGATGAAC CCGATACTTT AAAATTAGCT ACAGTGGCAC TTAAAGCTTA TGGATCTAAT GTAAAAGCAG TAGAAACAGC AGAAGAAGCG GTTAGTCTGG TTAAATGTTG GAATCCTAAT TTAGTGATTA GTGATTTAGC CATGCCTGGA ACTAATGGTT ATGAATTGCT CAGACGGCTT CAAGAAAGTG ATCATTTCAA TTTAAAAGTA ATTGCTCTCA CCGCTTATGT CAGCGAGGAA GAAAAAAATC GAGCCTTAGC CGCCGGGTTT AAACACTATC TCTCAAAACC CATTGAACCG GAAAAACTCA TTGCTGAAGT TTTTCAAGTA ATAACTCATC AAAATTGA
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Protein sequence | MNQEQISVFD PQKQTVQSSW SGRSEILLTQ QNKILKMIAT GQPLLEILDQ IINFMEKESG NALCSVLLLE KDGSKLRWGS APSLPEEYNR DVDGLLVGPC NGSCGTAVHR GEMVMVSDIA NDPLWHSART LALNHGLKAC TSVPIFNSKK EVVGTFAFYY RQSQHPTQYD FQLIEVAQSL AGIAIERQLM DEERNQLLKN EHSARLEAEQ LNQIKDEFLM MLSHELRTPL TAILGWSQLL KKGLITQKNK VDKALETIER NAKLESKLVD DLLDVSRILA NKLILKKEPI DLEFIIKLTL DSILLTAQAK EITIKTLIQS PNLKVWGDKQ RLQQVFWHLL SNAIKFTGEG GVITITLTQD NERAKIIIHD TGQGIKPELL PFVFKRFWQA DSSSQRIAGG LGIGLSIAHR LVELHNGQIQ AESLGEEKGA TFTVILPLQH SENPAHLGLN NSDKIKPPQN PLKGYRILIV DDEPDTLKLA TVALKAYGSN VKAVETAEEA VSLVKCWNPN LVISDLAMPG TNGYELLRRL QESDHFNLKV IALTAYVSEE EKNRALAAGF KHYLSKPIEP EKLIAEVFQV ITHQN
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