Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1417 |
Symbol | |
ID | 7108353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1559321 |
End bp | 1560235 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643479684 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002376729 |
Protein GI | 218438400 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCG TTACTAGAAG TATCAGAGAA CTGATTGCTA GTGGAATTAA ATTGCTTCCG GCCTTAATTA CCGCCCTAAT TATCATTATG TTAACCCGTT ATGCAGCCGA ATTGACTCAA AAGGTAGCAA CGCGGGTCGG AAACCGCGCT CTTCGCAGTC AATCCTTAAA AATATTACTG TCTAAAACCA GTTTTATTGC GACTTGGGTC TTTGGGATTA TTTTGGCCTG CGTTATTGCT TTTCCTGGAT TAAGATTAGG AGATGTTGTT GCTACTCTAG GATTAGGTTC GGTAGCGATT GGATTTGCTT TTCAAGATAT CTTTAAAAAC TTTTTAGCCG GCATACTTTT GTTAGTGCAA GAACCCTTCC GCATTGGCGA TCAAATCATT GTTAATGACT ATGAGGGGAC AGTCGTGGAA ATTAATATCC GCACCACAGA AATTGTCACT TATCAAGGCG AAAAAGTTTT ACTGCCCAAT TCTACAGTAT TTACCAGTGC CGTACAAGTC AGAACCGCTT TAGGAAGACG AAGAACTGAT TTAGGGGTAG GAGTGGATTA TAATACCCCT CTATCTCAAG CCAAAGACAT TTTACAACAC ACTTTAGAAC AAGTTGAGGG GGTTTTATCT GACCCTGAAC CTGAAATCGA TCTAGTCGCC TTTGGAGATA GTTCGATTGA TTTCATTGTT CGCTATTGGA CAGTTCCTCA ACAAAAAATG GTCAGAAGAA TTCAAACTCA AGTTATCCTG GCCATTAAAC AAGCTTTCGA TCGCGCCGAT ATTAATATTC CCTATCCTAT TCGTACCCTT TATTTTTACG ATCAGGATAA ATATAATGAC TATCTACCTG ATGATCAGGT TAACGGATAC GACAATAGGA ATAAACAAGA TCAAAAACTT TCTCAACAAC GTTAA
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Protein sequence | METVTRSIRE LIASGIKLLP ALITALIIIM LTRYAAELTQ KVATRVGNRA LRSQSLKILL SKTSFIATWV FGIILACVIA FPGLRLGDVV ATLGLGSVAI GFAFQDIFKN FLAGILLLVQ EPFRIGDQII VNDYEGTVVE INIRTTEIVT YQGEKVLLPN STVFTSAVQV RTALGRRRTD LGVGVDYNTP LSQAKDILQH TLEQVEGVLS DPEPEIDLVA FGDSSIDFIV RYWTVPQQKM VRRIQTQVIL AIKQAFDRAD INIPYPIRTL YFYDQDKYND YLPDDQVNGY DNRNKQDQKL SQQR
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