Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1162 |
Symbol | hrcA |
ID | 7112291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1270788 |
End bp | 1271870 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643479429 |
Product | heat-inducible transcription repressor |
Protein accession | YP_002376481 |
Protein GI | 218438152 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGTTC GACTCAAATT AAGCGATCGT CATCAAAATA TCTTACGGGC AACTATTCAA CATTATATTG CTACAGCAGA ACCTGTTGGG TCAAAAACGT TAGTCGAAGA GTATAATTTT AGCGTCAGTT CTGCTACCGT TCGCAATGTT TTAGGAAGAT TAGAAAAAGC CGGGTTACTC TATCAACCCC ATACCTCATC GGGAAGAGTC CCGTCTGATC AGGGTTATCG AACTTATGTC GATCAACTGA TTGTTCCTGA TGAAAAAATC GGTAAAAAAA TTGAAAAATC TTTAAATAAA GAGTTAAATT GGGACAGTTG GAGTTTTGAA GCTCTTTTAC AACGGGCAAC CCAAATTTTA GCCAATTTAA GCGGTTATAT CGCTTTGATT ACTTTGCCTC AATCTTCCGC TAACCGTCTG CGTCATCTTC AGTTGGTTCA AGTCTCTTCT AAGCAACTGA TGTTAATTAT GGTGACAGAT AGTTATCAAA CTCAATCAGT TTTAATCGAT AATCCTCTCT CTGTGCCGGA AGAGCAAGAG GATAATCAAG AGGGAATAGA AGAAGAATTA CAAATTTTAT CTAACTTTCT TAATAGTAAA TTAAAGGGGC TTTCTTTAGC AGAATTAGCC ACTTTAGACT GGAGTGAGTT GGATCAAGAA TTTACTCAAT ATACCAATTT TCTCAAAAAG TTATTAAGAG AATTAGCTCG AAATCTTCAA TCTTCTGTGA CGACTCCGAT CATTGTTCAT GGAGTTTCAG AAGTCTTACG TCAGCCGGAA TTTTCCCAAT TACAACAAAT TCAGATGTTA CTTCATCTGT TAGAAGAAGA ACAGGATCAA CTGTTGCCTT TAGTGTTTGA AATTTCTAAT CCTGCTGTCT TAATTAAGCG TGTTAGGGTT AAAATTGGCT CAGAAAATCC TTTAGAGTCA ATGCGTCCTT GTGCTTTAAT TTCTGCTACT TATAATCAAG GAGATTTACC GATCGGCAGT GTGGGAATTA TTGGCCCTAC AAGAATGTTA TATGAAAATA CTATCCCCCT AGTCGAATCT ACGGCGGATT ATCTTTCAGA CGCTTTAAGT TAA
|
Protein sequence | MSVRLKLSDR HQNILRATIQ HYIATAEPVG SKTLVEEYNF SVSSATVRNV LGRLEKAGLL YQPHTSSGRV PSDQGYRTYV DQLIVPDEKI GKKIEKSLNK ELNWDSWSFE ALLQRATQIL ANLSGYIALI TLPQSSANRL RHLQLVQVSS KQLMLIMVTD SYQTQSVLID NPLSVPEEQE DNQEGIEEEL QILSNFLNSK LKGLSLAELA TLDWSELDQE FTQYTNFLKK LLRELARNLQ SSVTTPIIVH GVSEVLRQPE FSQLQQIQML LHLLEEEQDQ LLPLVFEISN PAVLIKRVRV KIGSENPLES MRPCALISAT YNQGDLPIGS VGIIGPTRML YENTIPLVES TADYLSDALS
|
| |