| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0949 |
|---|
| Symbol | |
|---|
| ID | 7111771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 1050274 |
|---|
| End bp | 1053435 |
|---|
| Gene Length | 3162 bp |
|---|
| Protein Length | 1053 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643479218 |
|---|
| Product | heavy metal efflux pump, CzcA family |
|---|
| Protein accession | YP_002376273 |
|---|
| Protein GI | 218437944 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACT CAATTCTCAA TCAAATCCTT AAAAATTCCA TTGCCCAACG TTGGCTGATT
GTGGTTGGTG CAATTTTAGT GACGGTGTGG GGAGTGATTA GTGTTACCCA GATGCCTCTG
GATGTGTTTC CAGAATTTGC TCCTCCCCAA GTTGATATTC AGACAGAAGC CCCTGGCCTC
GCTCCAGAGG AAGTAGAAGC CCAAATCACT GTACCGGTTG AAAGTGCGGT CAATGGTTTA
CCCGGAGTAA CGACAGTGCG ATCGTCTTCT AAAGTTGGGC TGTCTATGGT ACAAGTAGTC
TTTAACCAAG ATGCCGATAT TTATAAAGCT AGGCAATCGG TTACAGAACG ATTACAACAG
ATTACTAATC AATTGCCCCA AGTCGCTCAT CCTCCCGAAA TTTCCCCTCT GGTATCCCCA
TTAGGCACGA TTTTACAATA TGCCTTCACC GTTAACGGGC AAGGGCAAAC CTCTGTGATG
GATTTACGCC GCTTGGTAGA AGTCACCCTA AGTAATCAGA TTCTCTCTGT GCCGGGAGTT
TCCCAAGTTA CGATTTATGG AGGAGATGAA CGACAGGAAC AGGTATTAGT CGATCCGGAA
AAATTGCGAT CGCTGGGAGT TTCCCTCACA GAAGTTAGGG ATGCTGCTAG GGGTGCAAAT
TCTAATGCTC CGGGTGGTTT TTTGATTCGT GGAGGTCAAG AATTGCTCAT TCGGGGCATC
GGCCAGGTGA AATCCGTTGA AGATTTACAG CAATCAGTGA TTAAAGTGCA AGGTGGCAAA
CCCATCTTGC TCAAAGACGT AGCAGAAGTA AAAACCGCAT CAGCCTTAAA GCGGGGGGAT
GCCAGCTTTA ACGGTCAACC GGCGGTGGTG TTGATGATTA ACAAACAGCC GGATGTAGAT
ACTCCCACCG TGACGAAAAA GGTTGAGGCC GTTATAGACT CTTTACAGCC CACATTTCCC
ACCGATGTAC AAATAAATCG CACTTTCCGC CAGTCCAATT TTATTGATTC TGCGATTCGC
AATGTCAGTG GTTCTCTCAT TCAAGGCATT ATCATTGTTT CGGTGATCAT GCTACTATTT
TTGATGAATT GGCGCACGGC GGCGATTACC TTGAGCGCGA TTCCCCTGTC CCTGTTGATT
GGGCTAATGT TCATGAAAGC CTTTGGCTTG GGCATCAATA CCATGACTCT AGGGGGGTTA
GTGGTTGCTA TCGGTTCAGT GGTGGATGAC TCAATTGTGG ATATGGAAAA CTGTTACCGA
GGACTCCGCA CCAATCAAGC CCAGGGCAAC CCTAAACACC CGTTTCAAGT GGTGTATGAT
ACCTCGGTAG AAGTGCGTTT AGCGGTCATT TTCTCTACGG TAATTATTAT TGTCGTATTT
GCGCCGATTT TTAGTTTAAC GGGGGTAGAA GGACGGATTT TTGCCCCGAT GGGTTTAGCT
TATTTGCTGT CAATTGCAGC CTCTACCCTA GTGGCCATGA CCCTTTCTCC GGCTCTGTGT
GCAATTTTGT TGGCTAATCA AACCCTACCC CAAGAAGGGA CTTTCATTTC TCGATTAGCC
GAACGCTTGT ATCGTCCCCT GCTTAAATTC TCCCTAAAAG CACCCCATAT CATTCTCGGA
TTAGCTCTTG CTTCATTAGT CGCTACTTTA GCTATTGTTC CCTCTTTGGG ACGGGTGTTT
TTGCCCGAAT TTCAGGAAAA ATCAATGGTT AACTCGATGG TGCTGTTTCC GGGTGTGTCC
CTCGATATGA CCAATAGAGC AGGGATGGCT CTTTATAATT CCCTTAAGGA TAATCCCCTC
TATGAATGGG TGCAGGTACG AGCCGGACGC ACTCCGGGGG ATGCAGACGG TGCTGGAGTT
AGCATGGCTC ACGTGGATGT AGAGTTAAGC GATCTTGCTC TTAAAGATAG GGAAAACAGT
GTAAAACAAT TGCGTGAAGA GTTCCTCAAG TTGCCCGGTG TAGCGCCTAA TATTGGCGGA
TTTATTTCCC ACCGGATGGA TGAAGTGTTA TCCGGGGTTA GAAGTGCGAT CGCGGTGAAA
ATCTTTGGCC CTGATTTGGC GGAACTCCGT AAAATAGGGG AACAGGTACG GGATGCTATC
GAACCAATTG AGGGAGTTGT AGATTTACAG CTTGAACCTC AGTTACCGAT TCGTCAGGTA
CAAATTCATT ATGACCGAAC CGCCGCCGCT AATTATGGTT TAAGTATGGC GGCCATTTCG
GAGCTTGTGG AAACGGCACT TAATGGTCAA ATTGTCTCCC AAGTCCCCGA AAATCAACAA
CTAATTAACA TTACCGTAGG ATTACAGGAA AAATCTCGGA ATAATTTAGA TGCTATTCGC
TCTATTCCTA TCTCTACCCC TACGGGTCAA ATGATTCCCC TGGGTACTGT TGCTAAAGTC
GATTATGGCA TGGGGGCAAA TGTAGTCAAT CGGGAGGATG TTTCTCGCTT AATTGTGGTG
TCTGCTAACG TTGCCGAACG GGATTTAGGT AGTGTAGTAG GAGATATTCA AGCCGCTATT
AGAGAAAAAG TACACTTACC CAAGGGTTAC TTTATCCAAT ACGGCGGACA GTTTGAAGCG
GAGCAAAATG CGACGAATAA TTTACTGATC TATAGCATCT TAGCTGCAAT TATTATTGCG
ATTTTGATGT TCTTCTCAGT AAAATCCTTG CCGGCAACCA TCGCTATCAT GCTTAATTTA
CCCTTAGCTT TGGTGGGGGG TGTTGTTTCT ATTGCCTTAA CTGGGGGGGT CATTTCGATC
GCTTCTCTGA TTGGATTTAT TACCCTATTT GGCGTTGCGG TGCGTAATGG TTTATTATTG
GTCGATAACT ATAATAGTAA ATTTGCTCAA GGAATGCGGC TTAAAGATAC TATCTTTAAA
GGTTCTCTAG AGCGAGTTAA CGCCATCCTC ATGACTGCTC TTACCTCTGC ATTAGGGATG
TTACCTTTGG CGATCGCCTC TGGAGCCGGT AACGAAATTT TACAACCTTT GGCCATTGTA
GTTTTGGGGG GTTTGATTAC TTCTACCGCC TTAACTTTAT TAGTAATTCC GGCGCTTTAT
GCCAAGTTTG GTAAGTGGTT AATTCCCAAA CAAAAAGCCA CCACAGTTGA AATCAATTCT
TCTGTGAAAA CTCAAACAAA AACCCCAGTA GGCTATTTTT AA
|
|---|
| Protein sequence | MLNSILNQIL KNSIAQRWLI VVGAILVTVW GVISVTQMPL DVFPEFAPPQ VDIQTEAPGL
APEEVEAQIT VPVESAVNGL PGVTTVRSSS KVGLSMVQVV FNQDADIYKA RQSVTERLQQ
ITNQLPQVAH PPEISPLVSP LGTILQYAFT VNGQGQTSVM DLRRLVEVTL SNQILSVPGV
SQVTIYGGDE RQEQVLVDPE KLRSLGVSLT EVRDAARGAN SNAPGGFLIR GGQELLIRGI
GQVKSVEDLQ QSVIKVQGGK PILLKDVAEV KTASALKRGD ASFNGQPAVV LMINKQPDVD
TPTVTKKVEA VIDSLQPTFP TDVQINRTFR QSNFIDSAIR NVSGSLIQGI IIVSVIMLLF
LMNWRTAAIT LSAIPLSLLI GLMFMKAFGL GINTMTLGGL VVAIGSVVDD SIVDMENCYR
GLRTNQAQGN PKHPFQVVYD TSVEVRLAVI FSTVIIIVVF APIFSLTGVE GRIFAPMGLA
YLLSIAASTL VAMTLSPALC AILLANQTLP QEGTFISRLA ERLYRPLLKF SLKAPHIILG
LALASLVATL AIVPSLGRVF LPEFQEKSMV NSMVLFPGVS LDMTNRAGMA LYNSLKDNPL
YEWVQVRAGR TPGDADGAGV SMAHVDVELS DLALKDRENS VKQLREEFLK LPGVAPNIGG
FISHRMDEVL SGVRSAIAVK IFGPDLAELR KIGEQVRDAI EPIEGVVDLQ LEPQLPIRQV
QIHYDRTAAA NYGLSMAAIS ELVETALNGQ IVSQVPENQQ LINITVGLQE KSRNNLDAIR
SIPISTPTGQ MIPLGTVAKV DYGMGANVVN REDVSRLIVV SANVAERDLG SVVGDIQAAI
REKVHLPKGY FIQYGGQFEA EQNATNNLLI YSILAAIIIA ILMFFSVKSL PATIAIMLNL
PLALVGGVVS IALTGGVISI ASLIGFITLF GVAVRNGLLL VDNYNSKFAQ GMRLKDTIFK
GSLERVNAIL MTALTSALGM LPLAIASGAG NEILQPLAIV VLGGLITSTA LTLLVIPALY
AKFGKWLIPK QKATTVEINS SVKTQTKTPV GYF
|
|---|
| |