Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0926 |
Symbol | |
ID | 7111748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1021746 |
End bp | 1023218 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643479195 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002376250 |
Protein GI | 218437921 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTC CCACCTCTGG CAAATCAAAC CGTCCCTTAA TCTGGATTCT CGCCCTCATG ACGGGTGGAG CGATTCTCTT GGGGACATAC ATTTACAAAA TGGTTGAAAA TCCTGCCCCC GAAACCGATC TCACTAAGCT CACTCAAGTG GCTCAACGAG AAACTTTATC GGTCAAAATT GAATCGAGTG GAACAGTTGA ACCGATAGAA AGTGTCAACA TTAGCCCCAA AAATCAAGGT CGTCTGGTCA AATTATTGGT CGATCAAGGA ATGCGAGTCA AACGGGGGCA AGTGTTAGCC GTCATGGAAA ATGCGGAGAT CCAAGCTCAG GGTTATCAAG CCCAAGCTCG TTTAGTTGAA GCCGAAGCCA ATTTTAAAGC CGCTCAAGTG AGAATTCCGG GAGAAATTGC CCAAGCTAAA GCGCGTCTAG CCCAAGCTCA AGCCCGTTTC GGCCAAGCTC AAGCCAGCTT ACGACAGTCT CAAGAAAGTA TTCCTAGAGA TATTGAACAA GCTAGAGCGC AACTGCGGGC GGTAGAGTCT CGTTATCAGT TGGCAGAAGC TCGCGTCAAA CGAAATCAAT CTTTAGCCGA GCAAGGGGCA ATTACAGAAG ATGATTTTGA TGCGGTTGTC AATGACTATC TCAATGCTAA AGCGAGTCTT CTCGAAGCCG TACAACGTCT TGAACAATTT AAATACACTG CCAACCCAGA AATTGCTCAA CTGCAACAAG ATGTTGTAGA AGCACAAGCC GCCGTAGGTG AAGCTCAAAT TGCCCTAGAA CAACGAGAAA AAACAGCCGA AGCCGAAATC GCTCAATTAG GGGCGGCGGT TCAAGCGGCT AAGGGGGCAC TCGAAGAAGT TAAAATCCAA TTTAACGATA CGGTGATTCG CGCTCCTTTT GAGGGAATTA TCACCCAACG CTATGCCAGT GAGGGAGCTT TCGTTACCCC AACTACTTCC GCCTCTAGTA CCGCCAGTGC CACATCTAGC TCAATTTTAG CCATGGCCAG GGGATTAAAA GTCGTGGCTA AAGTCCCTGA AGTAGATTTA AGTCTGTTAC AAACCGGACA ACCGGCCACC ATTATCGCCG ATGCTTTTCC CAATGAAGTG TTTAAAGGGC AGGTGGTTCG GATTGCACCA GAGGCCATCA TTGAGCAGAA TGTCACCTCC TTTGAAGTAA CGATCGCTTT ATTGACGGGT CAAGAGAAAC TTTTGTCTAA AATGAATGTG GATGTCAATT TTTTAGGTCA ACAAATCAAT GATGCTTTAG TTGTGCCTAC GGTAGCCATT GTGACTCAAG AAGGCCAAAC TGGGGTTTAT GTCCCTGATG AAGAAAATAA ACCTAAGTTT CAAGCCGTAG ATATTGGCTT AGTTTTGGAT GATAAAACCC AAATTTTATC CGGATTAAAT CAAGGCGAAC GGGTATTTAT TGATTTACCT GAACAACCCG AAAAAAAAGA TAAAGATCAG TAA
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Protein sequence | MDIPTSGKSN RPLIWILALM TGGAILLGTY IYKMVENPAP ETDLTKLTQV AQRETLSVKI ESSGTVEPIE SVNISPKNQG RLVKLLVDQG MRVKRGQVLA VMENAEIQAQ GYQAQARLVE AEANFKAAQV RIPGEIAQAK ARLAQAQARF GQAQASLRQS QESIPRDIEQ ARAQLRAVES RYQLAEARVK RNQSLAEQGA ITEDDFDAVV NDYLNAKASL LEAVQRLEQF KYTANPEIAQ LQQDVVEAQA AVGEAQIALE QREKTAEAEI AQLGAAVQAA KGALEEVKIQ FNDTVIRAPF EGIITQRYAS EGAFVTPTTS ASSTASATSS SILAMARGLK VVAKVPEVDL SLLQTGQPAT IIADAFPNEV FKGQVVRIAP EAIIEQNVTS FEVTIALLTG QEKLLSKMNV DVNFLGQQIN DALVVPTVAI VTQEGQTGVY VPDEENKPKF QAVDIGLVLD DKTQILSGLN QGERVFIDLP EQPEKKDKDQ
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