Gene PCC7424_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0883 
Symbolfmt 
ID7111687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp984588 
End bp985592 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content42% 
IMG OID643479152 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002376207 
Protein GI218437878 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG TTTTTTTTGG AACTCCTCAA TTTGCCGTAC CCAGTTTAGA ACGTCTGTTG 
GAGCATTCAG ACATAGATGT CGTTGCGGTT GTCACCCAAC CCGATAAACC GAGAGGCAGA 
GGAAAACAAC TCATTCCCTC TCCGATTAAA AAAGTGGCTT TAGACCATCA AATTCCGATT 
TGGCAACCTA AACGGGTGAA AAAAAATGCC CAAACTCTAA CTAAATTGAG AGAAACGAAT 
GCGGATGCTT TTGCTGTAGT CGCCTATGGT CAAATTCTAT CCGCAGAAAT TTTACAAATG 
CCCAAATTAG CCTGTATTAA TGTTCATGGC TCAATTCTGC CGAAATATCG AGGAGCAGCC 
CCCATTCAAT GGAGTATTTA TCATGGGGAA ACCCAAACCG GTATCACAAC TATGTTGATG 
GATGAGGGAA TGGACACCGG CGCAATGTTA CTCAAAGCTT ATACCCCGAT TCAATTATTA 
GATAATGCAG ATAAAATTGC CACGACTCTT GCTAATCAAG GGGCAGATTT ATTAATAGAA 
ACCTTATTAA AATTGGAACA AGGAGAGCTT AACCCCGAAA GTCAAAATTC AGAATTAGCC 
ACTTATGCGC CTTTAATTCA AAAAGAAGAC TATCTCATCA ATTGGACTCG TCACGCCCTA 
CAAATTCACA ATCAAGTGAG AGGATTTTAC CCCAATTGTT TCACTACTTT TCGGGAACAA 
CCCCTAAAAA TTTTAGCCAC TGCACCCCTA GGAGAGGCTT ACTGGGAACA TCTTCCCTCC 
AATATTGCTC AAAAAATTCA ACCCCAATGG ACAACTCTAT CCTCCCTCAC CAGCAGTCCT 
GGAGAAGTCG TAAACTTGAT TAAAAATTTA GGGCCAATCG TACAAACCGG GGAGGGATTA 
TTGCTATTGT TACAAGTACA ATTATCGGGC AAACGTCCCC AGTCTGGGTG GGATTTTGTC 
AACGGTACAC GCTTATCCGT CGGCGAAAAA TTTTTAATGG TGTAA
 
Protein sequence
MKVVFFGTPQ FAVPSLERLL EHSDIDVVAV VTQPDKPRGR GKQLIPSPIK KVALDHQIPI 
WQPKRVKKNA QTLTKLRETN ADAFAVVAYG QILSAEILQM PKLACINVHG SILPKYRGAA 
PIQWSIYHGE TQTGITTMLM DEGMDTGAML LKAYTPIQLL DNADKIATTL ANQGADLLIE 
TLLKLEQGEL NPESQNSELA TYAPLIQKED YLINWTRHAL QIHNQVRGFY PNCFTTFREQ 
PLKILATAPL GEAYWEHLPS NIAQKIQPQW TTLSSLTSSP GEVVNLIKNL GPIVQTGEGL 
LLLLQVQLSG KRPQSGWDFV NGTRLSVGEK FLMV