| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0736 |
|---|
| Symbol | |
|---|
| ID | 7109143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 814833 |
|---|
| End bp | 817898 |
|---|
| Gene Length | 3066 bp |
|---|
| Protein Length | 1021 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643479004 |
|---|
| Product | Na-Ca exchanger/integrin-beta4 |
|---|
| Protein accession | YP_002376060 |
|---|
| Protein GI | 218437731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACTA CGTCTTCCAT AGAATTTAGT CAAATTTTAT ATTCATATAG TGAAAATAGC
CAAATTTATC CTAATCAAAC CAGTATTACT CTAAATCGCA CTGGTAATAT AGACAATTGG
TCAACGGTGG AAGTTCAGTT AATAGGAGGT TCAGCCCAAC AAGGAAGCGA TTTTTATCTT
TCTTTGCCTC AATCGGTCAC GTTTGCCCCT GGTAAAACGG TTGAATTTTT TACGATAGAT
ATCTTCGACG ATGGAATGAT TGAAGGGACG GAAACGGTTA ATTTGGAAGT TATTTCTAAT
GGTGATCCTA ATACTATTAT AGGGACTAAC AACACGACAA CCTTAGAAAT CCTCGATAAT
GAGGTGTCTT ATATTCAGTT TAGTTCTTCA ACTTTTATAG GGAGTGAAAG TAATCAAGCT
TTACCCAATC AAGTGGGAGT AACTTTAACG CGGACGGGAA ATATTAATAG TTGGGCAGAG
GTAGATTTAT CCATAACAGG AGGGTCAGCA ATTGAAGGGT CAGATTTTTG GTTGACTTCG
CCACAACCGG TTAATTTTAA TCCAGGAGAA ACCCAGAAAA CAGTCTATTT TGCTCTCGCT
GATGATTGGC AATTAGAAAG GACAGAAACG GTTAATTTAA ACTTAGAAAC TTTCCCAGGT
AATTTAGACA CGGTTATCGG GTCTCAAGGG ACGGCAACTT TAGAAATCCT CGATAATGAG
GTGTCTTATA TTCAGTTTAG TTCTTCAACT TTTATAGGGA GTGAAAGTAA CCAAGCTTTA
CCCAATCAAG TGGGAGTAAC TTTAACGCGG ACGGGAAATA TTAATAGTTG GGCAGAGGTA
GATTTATCCA TAACAGGAGG GTCAGCAATT GAAGGGTCGG ATTTTTGGTT AATTTCCCCT
CAACCGGTCA GTTTTAATCC AGGAGAAACC AGTAAAACGG TCTATTTTGC TCTCGCTGAT
GATTGGCAAT TAGAAGGGAC AGAAACGGTT AATTTAAACT TAGAAACTTT CCCAGGTAAT
TTAGACACGG TTATCGGGTC TCAAGGGACG GCAACTTTAG AAATTCTTGA TAATGAGGTG
TCTTATATTC AGTTTAGTTC TTCAACTTTT ATAGGGAGTG AAAGTAATCA AGCTTTACCC
AATCAAGTGG GAGTAACTTT AACTCGGACG GGAAATATTA ATAGTTGGGC AGAGGTAGAT
TTATCCATAA CAGGAGGGTC AGCAATTGAA GGGTCAGATT TTTGGTTGAC TTCGCCACAA
CCGGTTAATT TTAATCCAGG AGAAACCCAG AAAACAGTCT ATTTTGATAT TAATGATGAT
TGGCAATTAG AAGGGACAGA AACGGTTAAT TTAAACTTAG AAACTTTCCC AGGTAATTTA
GACACGGTTA TCGGGTCTCA AGGGACGACA ACTTTAGAAA TTCTTGATAA TGAGGTGTCT
TATATTCAGT TTAGTTCTTC AACTTTTATA GGGAGTGAAA GTAATCAAGC TTTACCCAAT
CAAGTAGGAG TAACTTTAAC GCGGACGGGA AATATTAATA GTTGGGCAGA GGTAGATTTA
TCCATAACAG GAGGGTCAGC AATTGAAGGG TCGGATTTTT GGTTGACTTC GCCACAACCG
GTTAATTTTA ATCCAGGAGA AACCAGTAAA ACGGTCTATT TTGCTCTCGC TGATGATTGG
CAATTAGAAG GGACAGAAAC GGTTAATTTA AACTTAGAAA CTTTCCCAGG TAATTTAGAC
ACGGTTATCG GGTCTCAAGG GACGGCAACT TTAGAAATTC TTGATAATGA GGTGTCTTAT
ATTCAGTTTA GTTCTTCAAC TTTTATAGGG AGTGAAAGTA ATCAAGCTTT ACCCAATCAA
GTGGGAGTAA CTTTAACTCG GACGGGAAAT ATTAATAGTT GGGCAGAGGT AGATTTATCC
ATAACAGGAG GGTCAGCAAT TGAAGGGTCA GATTTTTGGT TGACTTCGCC ACAACCGGTT
AATTTTAATC CAGGAGAAAC CCAGAAAACA GTCTATTTTG CTCTCGCTGA TGATTGGCAA
TTAGAAGGGA CAGAAACGGT TAATTTAAAC TTAGAAACTT TCCCAGGTAA TTTAGGCACG
GTTATCGGGT CTCAAGGGAC GACAACTTTA GAAATCCTCG ATAATGAGGT GTCTTATATT
CAGTTTAGTT CTTCAACTTT TACAGGGAGT GAAAGTAACT CTAGTTCTCC TAACCAAGCA
GAAATTACGT TAATCCGAAG TGGTAATACT GAATATGGGA CACAAGTAGA AGTTTTATTT
ACTAATGGAA CAGCTACTGA AGGAATAGAC TTCGGCGGTT ATTATGGAGT TTCCCAATCC
GTACTTTTTG AACCCGGCGA AACAACTAAA ACTTTTAATA TAGATCTTAT TTCTGATGGA
ATAATTGAAG AGATTGAGAC AATTAACTTA CAATTAAATG CTGATCCAGC TAAAACAGAG
GCTAAAATAG GTTCTCAAAA TAAAACAACC CTAAATATTC GGGATGTTGA ACCATTTGCC
GGAGAAGGTT TTCAAGCTGG TTTTGAAGAA GGCAGTTTAA CTAACTGGAA TAGTCGTGGT
AATAGAAGTC TTAAAACTGC AACCTTTGGG GTTACTCCAA CTGAAGGTAA TTCTCAACTT
TTACTCACAA CTGGTACGGG TTCTATCACT GATACTAAAC TTGAAACTTT TGTCGGATTA
AATCTTGCCG AATTCGACAA TTTAATTAAT AATAATGCAA CTGAAGGATC AGCAATTAAA
CGGCGGTTAA CTGTAGAATC TGGAGATATT CTGAGTTTTG ATTGGAACTT TTTGACTAAT
CAAACCTCAA TAAGCCTCAA TACAGATTTT GCTTTTGTTT CTATTAATAA CTCTTTAACG
AAATTAGCTG ATATTGATAG TCAAATGGTA GATTCTAACA GTAATTTTGA GATAGAAACG
GGGTATAAAA CTTTTACCTA TCAGTTTACT GATTCTGGGT CTTTTAATGT CAGTGTTGGA
GTTTTAGATG TAGGAGATAC TCAGATTAAT TCTGGCTTGT TAGTTGATAA CTTTACTATT
ACTTAA
|
|---|
| Protein sequence | MSTTSSIEFS QILYSYSENS QIYPNQTSIT LNRTGNIDNW STVEVQLIGG SAQQGSDFYL
SLPQSVTFAP GKTVEFFTID IFDDGMIEGT ETVNLEVISN GDPNTIIGTN NTTTLEILDN
EVSYIQFSSS TFIGSESNQA LPNQVGVTLT RTGNINSWAE VDLSITGGSA IEGSDFWLTS
PQPVNFNPGE TQKTVYFALA DDWQLERTET VNLNLETFPG NLDTVIGSQG TATLEILDNE
VSYIQFSSST FIGSESNQAL PNQVGVTLTR TGNINSWAEV DLSITGGSAI EGSDFWLISP
QPVSFNPGET SKTVYFALAD DWQLEGTETV NLNLETFPGN LDTVIGSQGT ATLEILDNEV
SYIQFSSSTF IGSESNQALP NQVGVTLTRT GNINSWAEVD LSITGGSAIE GSDFWLTSPQ
PVNFNPGETQ KTVYFDINDD WQLEGTETVN LNLETFPGNL DTVIGSQGTT TLEILDNEVS
YIQFSSSTFI GSESNQALPN QVGVTLTRTG NINSWAEVDL SITGGSAIEG SDFWLTSPQP
VNFNPGETSK TVYFALADDW QLEGTETVNL NLETFPGNLD TVIGSQGTAT LEILDNEVSY
IQFSSSTFIG SESNQALPNQ VGVTLTRTGN INSWAEVDLS ITGGSAIEGS DFWLTSPQPV
NFNPGETQKT VYFALADDWQ LEGTETVNLN LETFPGNLGT VIGSQGTTTL EILDNEVSYI
QFSSSTFTGS ESNSSSPNQA EITLIRSGNT EYGTQVEVLF TNGTATEGID FGGYYGVSQS
VLFEPGETTK TFNIDLISDG IIEEIETINL QLNADPAKTE AKIGSQNKTT LNIRDVEPFA
GEGFQAGFEE GSLTNWNSRG NRSLKTATFG VTPTEGNSQL LLTTGTGSIT DTKLETFVGL
NLAEFDNLIN NNATEGSAIK RRLTVESGDI LSFDWNFLTN QTSISLNTDF AFVSINNSLT
KLADIDSQMV DSNSNFEIET GYKTFTYQFT DSGSFNVSVG VLDVGDTQIN SGLLVDNFTI
T
|
|---|
| |