Gene PCC7424_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0435 
Symbol 
ID7109292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp474551 
End bp476662 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content38% 
IMG OID643478708 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002375769 
Protein GI218437440 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA AGAACTTTGA GCAACAAATT CAAAAGGCAC ACTATCGCTG GCAGAATCTG 
CAAAAGAGTG CTGAAGAATC ATCAGAACCG TCAACCCATT GGCAAACAGA AATTATCACC
GAATTATCCA TCGCCCTTGA AGAGTTACGA GTTGCTACAG AAGAATTACA TGAGCAAAAT
GAACAATTAG ATATTGCTCG TGAAGAAGCA GAAGAAGTCC GTCAACACTA TCAAGATTTA
TTTGAATTTG CTCCTGACGG GTATATCGTC ACCGATGAAA AAGGGGTAAT TCAAGAAGCT
AATGAGGTCG CTTCCCAGTT GCTTAATGTT CAGAAAAAAT ATTTATTTAA TAAACCCATA
GATATTTTTG TAGCTAGAAT AGACCAAGAT ATTTTTAATA ATCATTGGTC AAAAATACAA
AAAACATTAA ATAATTTAGG TAATTATCAA CCCCAAAAAT TTATAAAAAG TTGGGAAATG
ATCTTACAAC CGCGACATCA AGACCCCTTC CCTGTAGCGG TTTCGGTTTC GGTTAGTGTC
AATATAAAAG GGGAAATCAT TAAACTGCGG TGGTTATTGC GGGATCTAAC TCAACAGAAA
AAAACTCAAG AACAACTGAG CGAACAAGCT GCCTTACTTA ATGTCGTGAG TGATGCTATT
ATAGTCTATA ATCTTCATGA TCAAATCGTC TTTTGGAATC GATCTGCCCA GGATTTATAC
GGGTGGACAG CCCAAGAAAT AGAAGGTAAA AATATTTCCC TAATTTTATC GGCAGACTCT
CAACAAAAAT TAGCCCAAAT CTATCAAAGT TTGTTTAAAC AAGGGGAGTG GAAAGGAGAA
TTAAATCAAA TCAAGAGAAC GGGTAAATCG ATTATTGTAG ACAGTCGTTG GACAGTAGTT
CGGGATGAGA AAAAAAATCT GAAATCTATT CTCGTTGTCA ATACCGATAT TACCCTAGCC
AAACAATTAG AAACGGAACG ACTGCAAAGC CAACGGTTAG AAATTATTGG CTCTCTCGCT
AGTGGGATTT CTCATGATTT AAATAATATT TTGACCCCAA TTTTAGGCAT GGCTCAACTT
TTACCCCGAA AACTCCCCCA TGCTGACGAA CAAATTCAGC AAATGTTTAA AATTATCGAA
ATTAATGCCC AACGGGGAGC AAGTTTACTC AGACAAATTT TGACCTTTTC TCGTGGATTT
ACCCCCAAAC AAGACCCTAT TTTAGTCGAT TCTCTGCTTT CAGACATCAC ACATTTAGCT
CAAGAAACCT TTCCTAAATC TATTACCATT GATAACTTTA TACCCCCTAA CCTTTGGGCA
ATTCGGGGAG ATACTACCCA AATTCATCAA GTATTAATGA ATCTTTGCTT AAATGGGCGG
GATGCCATGC CTGATGGGGG AAATTTAACC CTTACTGCCC AAAATATGGT CATTGATGAA
TGTTATACCA GTATGGAAAC TAATGCTCAA CCGGGCTTGT ATGTTGTGAT TACCGTCTCA
GATACAGGAG TGGGTATTCC AGAACCGATA AAAAAGCGAA TTTTTGAGCC ATTTTTCAGT
AGTAAAGAAC TCGGTAAGGG AACAGGTTTA GGGCTTTCTA TTGTCATGAA TATTGTTAAA
AATCATGGCG GGTTTATCAA AGTTTTGAGT GAACCCGGAA AAGGATCACA GTTTCAGGTT
TTTTTACCCG CAGTCAACAT CAGCTTATCA TCTGCAAAAA AGAACATAGA CTTACCTAAA
GGAAACGGAG CATTAATTTT AGTGGTGGAT GATGAAGCCA ATATTAACCA AACCACTAAA
CATTTACTTA ATACCTTTGG TTATCAAGTT TTAACCGCCA ATAACGGCAT AGAAGCCCTC
GCCCTCTACG CTCAATATCA TGATAAAATA GAGGCCATTT TAATGGACAT GATCATGCCC
TCAATGGATG GAATAACCGC TATCCGCACT CTACAAAAAA TTAATCCCCA AGTCAAAATT
ATTGCCACCA GTGGACTCAG TTCTATTGAG GAATCTGCCG ACATTTTCGA TGATAATGTC
AAAGCCTTTT TGCACAAGCC TTACACCTCA CAAGATTTAT TAACCACTTT ATATAAAGTT
CTTTCTAATT AA
 
Protein sequence
MDIKNFEQQI QKAHYRWQNL QKSAEESSEP STHWQTEIIT ELSIALEELR VATEELHEQN 
EQLDIAREEA EEVRQHYQDL FEFAPDGYIV TDEKGVIQEA NEVASQLLNV QKKYLFNKPI
DIFVARIDQD IFNNHWSKIQ KTLNNLGNYQ PQKFIKSWEM ILQPRHQDPF PVAVSVSVSV
NIKGEIIKLR WLLRDLTQQK KTQEQLSEQA ALLNVVSDAI IVYNLHDQIV FWNRSAQDLY
GWTAQEIEGK NISLILSADS QQKLAQIYQS LFKQGEWKGE LNQIKRTGKS IIVDSRWTVV
RDEKKNLKSI LVVNTDITLA KQLETERLQS QRLEIIGSLA SGISHDLNNI LTPILGMAQL
LPRKLPHADE QIQQMFKIIE INAQRGASLL RQILTFSRGF TPKQDPILVD SLLSDITHLA
QETFPKSITI DNFIPPNLWA IRGDTTQIHQ VLMNLCLNGR DAMPDGGNLT LTAQNMVIDE
CYTSMETNAQ PGLYVVITVS DTGVGIPEPI KKRIFEPFFS SKELGKGTGL GLSIVMNIVK
NHGGFIKVLS EPGKGSQFQV FLPAVNISLS SAKKNIDLPK GNGALILVVD DEANINQTTK
HLLNTFGYQV LTANNGIEAL ALYAQYHDKI EAILMDMIMP SMDGITAIRT LQKINPQVKI
IATSGLSSIE ESADIFDDNV KAFLHKPYTS QDLLTTLYKV LSN